- Transcript 'KH2012:KH.L122.1.v3....'
Transcript Model
Transcript Id
KH2012:KH.L122.1.v3.R.ND1-1
Possible name(s)
SRSF12; SRSF2; SRSF8
Gene model
Location
KhL122 [62,582 / 64,906]
Amino acid sequence
Length: 192
>KH.L122.1.v3.R.ND1-1
IIVISLLISQTNVKMSRGGRPPPGLDNMVSLKVDNLTYRTSPETLKRSFEKYGDVGDVYI
PRDRYSRESRGFAFVRFYDKRDAEDAMDCMDGKTMDGRVLRVAMARYGRPTEERRDSGRR
GGGGGGMRRRRRSYSRSRSRSRGRKYSQSVSRSRSRSRDRERRRSPSHERRSPTPSPRRS
RSYSRSPAANGD
Nucleotide sequence
Length: 1,010
>KH2012:KH.L122.1.v3.R.ND1-1
AGATTAAATTATCGTCATAAGTCTCCTAATATCGCAAACAAACGTAAAAATGTCGCGAGG
TGGACGACCCCCTCCTGGTTTAGATAACATGGTTTCATTGAAAGTAGATAACTTAACATA
CAGAACATCACCGGAGACATTAAAACGATCGTTTGAGAAATACGGAGACGTCGGCGATGT
ATACATACCACGGGACAGATATTCCCGAGAAAGTCGTGGATTTGCTTTCGTTCGTTTCTA
CGACAAACGAGACGCTGAAGACGCGATGGATTGTATGGATGGAAAGACCATGGATGGGAG
AGTGCTGAGAGTTGCCATGGCACGATATGGTCGTCCTACTGAGGAGAGGAGAGATTCTGG
GAGGAGAGGAGGAGGTGGAGGAGGGATGAGGAGGAGAAGGAGGAGTTATTCACGATCACG
CTCCCGATCACGAGGAAGGAAATATTCACAAAGTGTTTCAAGATCAAGGAGCAGATCCCG
TGATCGTGAAAGAAGAAGAAGTCCTTCACATGAGAGGCGCAGTCCAACTCCATCTCCTCG
TCGATCAAGATCATATTCAAGATCACCAGCAGCCAATGGAGATTGAAGACTTGTCACCAA
CTTTATCGTACCAGCAAATAATTTGCATGGGTAGCAGTGCCGGTAGCAGTGGGAATTATG
CAGTAGCAGACGAAGAATTAAATAGTAGCAGATGCGTGTTGCTGTGCCGAGAATCCGGTT
AATTTTATGTTTGTTTCTTATAATAGTAAGTAATTTTTTAAACATACCGCAAAACTGTTG
TTAAACATTGTTATTTTTTCTTGCACGGAGAACCTATGCCCTTTCAAACTTGGTGTATTT
TTAAAACGATGGTACTTGGTTATGCTCATTTATTATAGCCAATTAACCACATAATAGACA
TAAATATAATAATATGAACCATAACTAATGCTTATCTTTGAATTTGTGAATATTTGATAG
AATTTATTTAAAGATGTAAGTACAGATTGGGACCTTTATTTACTTACAAC
| Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[9-128] 3.1E-25 |
| SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[22-136] 5.37E-31 |
| ProSiteProfiles |
RRM_dom (IPR000504) - T[29-107] 18.53 |
| SMART |
RRM_dom (IPR000504) - T[30-103] 2.4E-23 |
| SMART |
RRM_dom_euk (IPR003954) - T[30-103] 4.0E-4 |
| Pfam |
RRM_dom (IPR000504) - T[32-101] 2.6E-20 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SRSF2_HUMAN | 78.723 % | 156 | 2.14E-48 |
| SRSF8_HUMAN | 68.132 % | 135 | 1.79E-39 |
| SRS12_HUMAN | 45.361 % | 80.5 | 1.18E-18 |
