Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.L119.8.v1.A.SL1-1

Possible name(s)

SNX11; SNX12; SNX3

Gene model

KH2012:KH.L119.8

Location

KhL119 [79,071 / 81,962]

Sequences

Amino acid sequence

Length: 418

>KH.L119.8.v1.A.SL1-1
KKPPSLPFPGIIGTFRKRYLEERQQILTDFLQKVVRQTVFLSNTALHLFLQTRLGKKEMD
AMLKDARRRGCMDCIRKAVSLYGAVRPYVSDTQPPEIISESLSTCSVGSCQEYSDSDEFN
SSFCSTNNDRVIGHNNNTKLDENDWVIVCTTPSEEDLQNKHLIESTAYTNVTWLSPRGID
NLGGRKELVLTRRIQSDQIDISSRNYSGVDITQSNSLGTLTNCQSRLDAFRRSSSENALH
NKLNRHSARRSRANNPKVVNTGNPTDCSSSPPQENATKDNSLYSTPEETFQHCRTSNTNL
VGNNLTEVQIHYSSDDKNQNADPVHNLDPISEPVKNDQPDSAQSEVKAFINKESKAAERQ
ISSKVFRSFSAPKQHRQSTYFPRTSSLDSCLGNRSQCIKVTEPKLFGTDGRYKHQILV

Nucleotide sequence

Length: 1,731

>KH2012:KH.L119.8.v1.A.SL1-1
GAAACAATTAATTAGGTTTTGCAGCAATGATTAACATAATGGACAAGCATCATGATAATA
TATCTCCTGATGAACAAAAGGAGTACATCCATGTTCAAGTATCCAACCCCACCATTCACA
ACACGCACGACGAAGGCAGATTCACCACTTACCAAGTTACACTAAAAAAAACCACCAAGT
TTGCCATTTCCTGGAATCATCGGAACGTTTAGAAAGCGTTATCTCGAAGAAAGGCAACAA
ATTCTAACCGATTTTTTACAGAAGGTTGTGCGACAAACAGTGTTTCTTTCTAACACTGCC
CTCCACTTGTTTCTGCAAACACGACTGGGGAAAAAGGAAATGGATGCGATGCTTAAAGAT
GCTCGTAGAAGAGGATGCATGGACTGCATCAGAAAAGCAGTGTCTTTGTACGGAGCCGTT
CGCCCTTATGTTTCGGACACGCAACCTCCTGAAATTATTTCAGAATCTCTTTCCACTTGT
TCAGTAGGAAGTTGTCAAGAATATTCGGACAGCGATGAGTTTAACTCAAGTTTCTGCAGC
ACTAACAACGACCGGGTAATCGGTCACAATAATAATACTAAGTTAGACGAAAATGACTGG
GTAATCGTCTGTACAACACCATCCGAGGAAGATCTGCAAAACAAACATTTGATTGAGTCT
ACAGCATACACAAACGTTACTTGGTTGTCCCCACGCGGCATCGATAACTTGGGAGGAAGG
AAAGAACTTGTCCTAACACGTCGGATTCAATCTGATCAAATTGACATTTCGTCAAGGAAC
TATAGTGGTGTCGACATAACTCAGTCCAACAGCTTAGGAACGTTGACCAACTGTCAAAGT
AGACTAGACGCTTTTCGGAGGTCGTCATCCGAAAACGCACTGCATAATAAACTCAACCGG
CATTCTGCCCGCAGATCAAGAGCAAACAATCCAAAAGTGGTTAACACTGGTAACCCGACA
GATTGTTCATCATCCCCGCCTCAAGAAAACGCCACCAAAGACAACAGTTTATATTCCACT
CCAGAAGAAACTTTCCAACATTGCCGAACATCGAACACAAACTTGGTGGGAAACAATTTA
ACCGAAGTCCAAATTCATTATTCAAGTGATGATAAAAATCAAAATGCTGATCCTGTACAT
AACTTGGATCCAATCAGCGAACCTGTAAAGAACGACCAGCCTGATTCAGCCCAGTCTGAG
GTTAAAGCATTCATAAATAAAGAATCAAAAGCCGCGGAAAGGCAAATCAGTTCGAAAGTT
TTTCGAAGTTTCTCCGCACCAAAGCAACACAGACAATCCACGTATTTTCCTCGTACCAGT
TCTCTGGATTCGTGTCTGGGTAACCGCTCACAGTGTATAAAAGTTACCGAACCAAAGCTT
TTTGGTACAGATGGTCGATATAAACACCAGATTCTCGTTTAGCTGATATCGATGAATGAA
TTATCGTTTAATATTCGTTTTGTTGTAATTCTTTTAAGTGATTTATCATTTAGTCCGCTC
TCAATTTTTAATCTTACAACATAGTTTATATATGTCAGCACGTCTTTTTTATTTTTTAAA
GCAATATTAGTTACAAGATCATCTAATTATTATAATCGGCATATAATAGCTTTTCGGAGC
AGCAGCAATATGCTTCATTGTTAATTTTTAAAATAATCGTTTACATATTGTTGGGGGATT
TACAGTTTTGTTAAATGGTTTGATTTAATAAAACAAACTTTTCAAAAATTA

InterProScan

Gene3D	PX_dom_sf (IPR036871) - T[1-82] 5.8E-7
SUPERFAMILY	PX_dom_sf (IPR036871) - T[3-52] 2.62E-6
Pfam	Phox (IPR001683) - T[4-52] 5.6E-5

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value