- Transcript 'KH2012:KH.L119.19.v1...'
Transcript Model
Transcript Id
KH2012:KH.L119.19.v1.A.nonSL21-1
Possible name(s)
TUBA3C; TUBA3D; TUBA4A
Gene model
Location
KhL119 [175,754 / 179,488]
Amino acid sequence
Length: 457
>KH.L119.19.v1.A.nonSL21-1
FVEEINLKMRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTF
FSETGAGKHVPRAVFVDLEPTVVDEIRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGK
EHVDTVLDRIRKLSDQCSGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIY
PAPQISTAVVEPYNSVLTTHTTLEHSDCAFMVDNEATYDICRRNLDVERPTYTNLNRMIG
QIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPIISAEKAYHEQLSVAEIT
NACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIAAIKTKRTIQFVDWCPTGFK
VGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEG
MEEGEFSEAREDLAALEKDYEEVGIDSAEDQEEEEEY
Nucleotide sequence
Length: 1,729
>KH2012:KH.L119.19.v1.A.nonSL21-1
TGAATTATTTCGACTATTTTGTTTAATTTGTCGAAGAAATTAACTTAAAGATGAGAGAAT
GCATATCAATTCATGTTGGTCAAGCTGGTGTCCAGATGGGCAATGCTTGTTGGGAGTTGT
ATTGCTTAGAGCACGGCATCCAACCCGATGGTCAGATGCCAAGTGACAAGACAATTGGAG
GGGGTGACGATTCGTTCAACACTTTCTTCAGTGAGACAGGAGCAGGAAAGCATGTTCCAA
GAGCAGTTTTCGTCGACCTGGAACCGACGGTTGTTGACGAAATACGTACCGGCACGTATA
GACAACTGTTTCATCCCGAACAGCTAATCACCGGCAAAGAAGATGCTGCAAATAACTACG
CTCGTGGCCACTACACTGTCGGAAAGGAACATGTTGATACTGTGCTTGATCGCATTCGAA
AGCTTTCAGATCAATGCAGTGGCTTGCAGGGATTTTTGATCTTTCATTCGTTTGGTGGTG
GCACCGGCTCCGGTTTCACTTCTTTGCTAATGGAAAGACTTTCAGTGGATTATGGGAAGA
AATCCAAACTGGAATTCGCAATATACCCAGCACCTCAGATATCTACCGCTGTTGTGGAGC
CGTACAACTCGGTTCTAACAACGCATACAACCCTGGAACATTCAGACTGCGCATTTATGG
TGGACAATGAAGCAACTTACGATATTTGCCGAAGAAACTTAGATGTGGAAAGACCTACTT
ACACAAACCTTAATCGTATGATTGGTCAGATCGTTTCATCCATCACAGCTTCGTTACGTT
TTGATGGCGCTTTGAACGTGGATTTAACGGAGTTTCAAACCAACCTGGTGCCATATCCAC
GTATTCACTTCCCATTGGTCACGTATGCTCCAATCATCTCTGCTGAGAAAGCTTACCACG
AGCAATTATCAGTAGCTGAGATCACCAACGCGTGCTTTGAACCAGCCAATCAGATGGTGA
AATGCGACCCACGTCATGGGAAGTACATGGCATGCTGCATGTTGTACCGCGGTGATGTTG
TCCCGAAGGATGTGAACGCTGCTATTGCTGCGATCAAAACTAAACGAACCATCCAGTTCG
TCGATTGGTGTCCAACTGGTTTCAAAGTTGGTATCAACTACCAACCACCCACCGTTGTAC
CAGGTGGTGATTTGGCAAAAGTTCAACGAGCGGTTTGCATGTTGAGCAATACAACAGCTA
TTGCCGAAGCTTGGGCTCGTCTTGACCACAAATTCGACTTGATGTACGCCAAGCGTGCAT
TCGTTCACTGGTATGTCGGCGAAGGAATGGAAGAAGGAGAATTCTCCGAAGCTCGCGAAG
ATCTCGCTGCTCTCGAGAAAGATTATGAAGAAGTTGGTATTGATTCCGCCGAGGACCAGG
AAGAAGAGGAAGAATATTAAGGAAACTTGAAATCTTGGGATAAACTTGTGATTTTATGTG
AATTTCAGTTTACCGGTCACGTAAAGTGTGTTATTAGTACGCTTAAAGTTGCCTTAAAAA
TATAAAAGCGGGTTTCACTTATAAATGCTACTCCGGTTGAAACAATTGAAAGATAATGGT
TAAAAAAGGAGAAACAGTATTTTAAGTGGGAAACTTGTGTCTGCACCATTTCGTTATTTC
ACAGGGTAGTTTGGTTATAAACCTTCCTTACTTTCGAGTTCGTAAAATAACGAGCAACAT
TCACTTTTACTTCTCGAATTATCGGTAAGATTGAAAAACGGTCGTTAAA
| Gene3D |
Tubulin/FtsZ_GTPase_sf (IPR036525) - T[9-276] 3.2E-130 |
| SUPERFAMILY |
Tubulin/FtsZ_GTPase_sf (IPR036525) - T[9-252] 1.31E-99 |
| PANTHER |
Tubulin (IPR000217) - T[10-454] 0.0 |
| Pfam |
Tubulin_FtsZ_GTPase (IPR003008) - T[11-221] 5.0E-67 |
| PRINTS |
Tubulin (IPR000217) - T[18-38] 2.5E-88 - T[61-80] 2.5E-88 - T[103-114] 2.5E-88 - T[116-140] 2.5E-88 - T[142-160] 2.5E-88 - T[161-182] 2.5E-88 - T[186-199] 2.5E-88 - T[200-220] 2.5E-88 - T[388-416] 2.5E-88 |
| PRINTS |
Alpha_tubulin (IPR002452) - T[26-41] 1.0E-119 - T[53-66] 1.0E-119 - T[96-109] 1.0E-119 - T[128-136] 1.0E-119 - T[156-168] 1.0E-119 - T[169-180] 1.0E-119 - T[222-234] 1.0E-119 - T[282-297] 1.0E-119 - T[329-350] 1.0E-119 - T[355-368] 1.0E-119 - T[368-387] 1.0E-119 - T[393-409] 1.0E-119 - T[430-446] 1.0E-119 |
| SMART |
Tubulin_FtsZ_GTPase (IPR003008) - T[57-254] 3.1E-80 |
| ProSitePatterns |
Tubulin_CS (IPR017975) - T[150-156] . |
| SUPERFAMILY |
Tub_FtsZ_C (IPR008280) - T[254-443] 4.27E-87 |
| SMART |
Tubulin/FtsZ_2-layer-sand-dom (IPR018316) - T[256-401] 7.1E-60 |
| Pfam |
Tubulin/FtsZ_2-layer-sand-dom (IPR018316) - T[271-399] 1.6E-51 |
| Gene3D |
Tubulin/FtsZ_C_sf (IPR037103) - T[277-391] 2.1E-67 |
| Gene3D |
Tubulin_C (IPR023123) - T[392-445] 3.1E-34 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TBA3C_HUMAN | 95.9 % | 875 | 0 |
| TBA3D_HUMAN | 95.9 % | 875 | 0 |
| TBA1C_HUMAN | 93.318 % | 874 | 0 |