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  1. Transcript 'KH2012:KH.L116.79.v1...'

Transcript Model

Transcript Id

KH2012:KH.L116.79.v1.A.SL1-1

Possible name(s)

NPLOC4

Gene model

KH2012:KH.L116.79

Location

KhL116 [70,738 / 73,662]

Sequences

Amino acid sequence

Length: 444

>KH.L116.79.v1.A.SL1-1
IIENLSIEPWDEVYLKEKEIKFLSFHAYMRQQTAGVDKGKYFHLENFKAARKLDSNSKKH
SVVDLPSAVTLNRQKFRHVDNIMFENREIVDRFLNYWRKSGNQRMGYLYGRYSPHSEVPL
GIKAEVCAIYEPPQESTKNWLQFHPDPNEEAVEYIAKKLNLRKVGWILSDLTVEDRSKGT
VKNTRHSDTHFLTAEECITAATFQNNYPNPCKLASDGKYGSKFATVIVSGDNDCQISFEG
YQVSNQGMSLVADECLLPTLDAPELGYIRESSPELFVSDVYYKEKDKYGNEITKLARPLP
LEYLLTDVPTAFSLNSQYSCSNAVAGFPVPYRDTIGEVQSLSSLSKYLNQFKPDQFVDAV
SDFNLLVYLYSNDTISFKNEMDVLLDAVRTHDNGLASHWKECASWSTLEELMRHSNSPMD
TASSSHHSMDPEMREAIERSLQMQ

Nucleotide sequence

Length: 2,051

>KH2012:KH.L116.79.v1.A.SL1-1
ACACTTGCTTGCCAATACTAAGTAATTAGTTTTTAATACAAGAAACCATAATCGTAATTA
AAAATGATCATAAGAATTCAGTCTTCTGATGGTACAAAACGAATAGAAGTCTCGAGTAGT
GACACAGTTGCCTCTCTACTGCAACAAGTGGAGAAATCCTTTGCGCTTAAGGGTGATGGG
TGGGGGGTGTTTAAATCAAGAAATTACCAAGATGAAGTTAAAAAGTCAAAAAGCAAACTT
AGAACTGCTGGACTGAACCACGGAGATATGTTGTTTTTGAAATCACAGTCCAGTGTTTCA
AAAATAAGTGAAGAACGACCGTCATCTGCTGTGGAAGCAGTGGAAGTGGTGGAGGATGCA
ATTGATGTTGAATTATTGAGAATCTTTCAATTGAACCCTGGGATGAGGTATATCTTAAGG
AAAAAGAGATAAAATTCTTGTCATTTCATGCTTACATGCGTCAACAAACTGCTGGGGTGG
ATAAAGGAAAGTATTTTCACCTTGAAAACTTTAAAGCAGCGAGAAAATTGGATTCGAACA
GCAAGAAGCATTCCGTGGTTGATCTACCATCTGCGGTCACTTTAAATAGACAAAAGTTTC
GGCATGTAGATAACATTATGTTTGAAAATCGTGAAATTGTTGATCGTTTCTTGAATTACT
GGAGAAAATCCGGCAATCAAAGGATGGGGTATTTGTATGGACGTTACAGCCCGCATTCTG
AGGTGCCACTTGGTATAAAAGCAGAAGTTTGTGCAATATATGAACCTCCTCAAGAAAGCA
CGAAAAACTGGCTGCAATTTCATCCAGACCCCAATGAAGAAGCAGTTGAATATATCGCTA
AAAAGTTGAATTTACGAAAAGTAGGTTGGATCCTTTCAGATTTAACGGTAGAAGACCGTT
CGAAAGGGACAGTTAAAAACACTAGGCACTCTGACACTCACTTCCTGACTGCTGAAGAGT
GTATTACTGCTGCTACATTCCAAAATAACTATCCCAACCCATGCAAACTCGCATCTGATG
GAAAGTATGGGTCAAAATTTGCTACTGTTATTGTGTCGGGAGATAACGACTGCCAAATCA
GTTTTGAAGGCTACCAGGTATCAAATCAAGGGATGTCCCTTGTTGCCGACGAATGCTTGT
TACCTACACTAGACGCACCAGAGCTTGGTTATATAAGGGAAAGCTCGCCTGAATTATTTG
TTTCTGATGTGTATTACAAAGAAAAAGACAAGTATGGTAATGAAATCACTAAACTGGCAC
GGCCCCTACCATTGGAGTATTTGCTTACTGATGTTCCTACAGCATTCTCTCTGAACTCTC
AGTACTCATGCAGTAACGCTGTAGCTGGCTTTCCAGTTCCTTACAGAGACACTATTGGTG
AAGTACAATCTTTGTCGTCACTTTCAAAATATTTAAACCAGTTTAAACCGGATCAGTTTG
TGGATGCTGTGTCTGATTTTAACCTTCTGGTGTACCTATACAGCAATGATACAATCTCAT
TTAAGAATGAAATGGATGTGCTGTTAGATGCAGTCCGCACTCATGACAATGGCCTTGCAA
GTCACTGGAAAGAATGTGCCAGCTGGTCGACACTGGAGGAGCTAATGAGACACTCAAATA
GTCCAATGGACACAGCCTCGTCATCTCACCACTCGATGGACCCAGAGATGCGCGAAGCAA
TTGAAAGAAGTTTACAAATGCAATAAGAAATGTAATTCCACTGTTTACCAAGCAATACTT
TAATGGTGAAAATGTACATCCATTTTTTCACATTTATCAATTAAACCTTAGAAAATAAGT
TTATTGGAACACCATTATTAAAAAAACAATGTATTTTTAAATATCACAATATTTATTTTG
TTCTCCAATGAATACTAGTCATATTTTTCCCTTGTTGGTATGCTAGTAAATAGCACAGGT
GTGTAATTATAGTTTATTTTCCATAAATGTGTTGGACAATGCATTATATTTCCCAATTTG
CTGTTTCACTTTCAGTTCTCACTTTAAAAGTTCAATAAATAATTCAAATTCTGTATCGCA
TTTCAAAAAAA

InterProScan

PIRSF
Npl4 (IPR016563) - T[2-416] 3.4E-131
Pfam
NPL4_Zn-bd_put (IPR007716) - T[6-101] 2.3E-24
CDD
NPL4_C (IPR007717) - T[70-369] 2.30103E-126
ProSiteProfiles
MPN (IPR037518) - T[82-219] 27.174
Pfam
NPL4_C (IPR007717) - T[104-412] 1.6E-105

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
NPL4_HUMAN 52.745 % 462 4.22E-159