- Transcript 'KH2012:KH.L11.3.v1.A...'
Transcript Model
Transcript Id
KH2012:KH.L11.3.v1.A.SL1-1
Possible name(s)
SLCO3A1; SLCO4C1; SLCO5A1
Gene model
Location
KhL11 [17,792 / 25,672]
Amino acid sequence
Length: 780
>KH.L11.3.v1.A.SL1-1
RYYVMSNNRDVTVRPEITLQLPTSSAFAKTPAKIDTGCGVWIVRPRWLARFATPKWFLAA
ISFFILIQSMLVSGITSSVITTIEKRYGLKSAESGLIVSSFDIGSLIVVVFISYFGGKSH
RARIVGIGAIVVSIGAAMFAFPQFISSPYQPPNHLPQTSYKLMCRPNATNTSDVLCQAQE
ANAVYLSLFVVSNMIMGIGSTPIYTLGTTFIYDNVARDDASFYIAIVYAMGAVGPAVGYL
LGGFFLTFYIDLGNLISSDDPRFLGAWWLGYLISAGLILVSSFFLILFPRKLKFNPPLET
PMDSSLGEVPSTPVTETTVEENFESLDSSVIGFGDNLKDLPKAFLSLLTNPIYLCVTISA
TLEFSTVTAFLTFVPKYLQSHFNSDTVKSSIMTGAILVPSAGTGILLGGYVIKRFRLNMT
GCAQTALLSNLLSLLLFISVFFISCETPFIIGVNKFVEDPMSNVLMKGLPSACNSDCSCE
TSTFSPICISGLTYYNPCYAGCGVKVDGNATQMFSNCSCHTPVAGSNDDIGVAGSCDRDC
SASLIPFLFCLFLVTMATVCAHTPSLMVTYRCVRNDERPFAAGLQFVFLRTLAYIPAPIY
FGSAIDQACLLWKGSTDECVGSDGSCLLYDADKFRSIFFGVAFALKIVAFCFVFMSWVLC
RRKHSEHTHTTRWRRHRRRKMREKREGKMEQEGKMGRANNPNTISGITDSSIPEIYVSNP
QPLPVLPDTNNQVVSSGSETSVCSTGSKSSNKPLIKNELELKTISTNQKPAMNSRSEDPL
Nucleotide sequence
Length: 2,807
>KH2012:KH.L11.3.v1.A.SL1-1
GGGGTAGATAACTTTGCTGTATTGCTGACGTCATAGCGCTATTACGTCATGAGTAACAAC
CGTGACGTCACAGTGCGACCGGAAATTACGTTGCAACTACCTACGTCATCAGCTTTCGCA
AAAACACCAGCGAAGATAGACACAGGATGTGGTGTATGGATCGTCCGACCTCGTTGGTTG
GCGAGGTTTGCGACACCGAAGTGGTTCCTTGCAGCGATATCGTTTTTCATCCTGATCCAG
AGTATGTTGGTGTCGGGAATCACAAGTTCCGTGATCACAACTATTGAAAAAAGGTACGGG
CTGAAAAGTGCTGAGTCAGGTCTCATAGTGTCCAGTTTCGACATCGGAAGTTTAATTGTC
GTCGTTTTTATTTCGTATTTCGGCGGCAAAAGCCACCGTGCGAGAATCGTGGGAATCGGG
GCCATTGTTGTGTCAATAGGTGCCGCCATGTTCGCCTTCCCTCAATTTATTTCCTCCCCG
TACCAACCCCCTAACCACTTGCCACAAACATCTTATAAACTGATGTGTCGACCGAACGCA
ACGAACACGTCCGATGTTTTGTGCCAAGCGCAGGAAGCAAACGCAGTTTACCTTTCATTA
TTCGTGGTTTCAAACATGATCATGGGAATTGGGAGCACACCGATATACACGCTCGGTACG
ACTTTTATTTACGATAATGTTGCAAGGGACGACGCTTCGTTTTATATCGCGATTGTATAC
GCCATGGGAGCTGTAGGACCAGCGGTCGGGTACCTCCTCGGTGGGTTCTTTCTCACTTTT
TACATCGACCTTGGAAACCTCATTTCATCTGATGACCCTCGGTTCCTGGGAGCTTGGTGG
TTGGGTTATCTCATCAGTGCTGGTTTGATCCTCGTGTCGTCTTTCTTCCTCATCTTGTTT
CCAAGAAAGTTAAAGTTTAATCCTCCCCTCGAAACGCCGATGGATAGCAGTTTAGGGGAA
GTCCCGTCCACCCCCGTTACCGAGACGACCGTCGAGGAAAACTTTGAAAGTTTGGATTCT
TCTGTTATTGGGTTTGGGGATAATTTAAAAGATTTACCGAAAGCGTTTCTGTCCCTCCTC
ACCAACCCCATATACCTTTGCGTCACAATCTCTGCAACTCTGGAATTTTCCACCGTCACC
GCTTTTCTTACGTTTGTGCCAAAATATTTACAAAGTCACTTCAACAGTGATACTGTCAAG
TCAAGCATTATGACTGGAGCGATCCTCGTTCCCAGTGCAGGGACCGGCATCTTACTCGGG
GGTTACGTCATAAAGAGGTTTCGTCTAAATATGACGGGATGCGCGCAAACCGCGTTGCTA
AGCAACCTGTTGTCCCTTCTTCTCTTCATCTCAGTTTTTTTCATCAGCTGCGAAACCCCG
TTCATAATCGGGGTTAACAAGTTCGTTGAGGACCCCATGTCTAATGTTTTAATGAAAGGT
TTGCCATCTGCTTGTAACTCCGATTGTTCGTGCGAAACATCGACGTTTAGCCCGATATGT
ATAAGTGGACTTACATATTATAATCCATGTTATGCTGGATGTGGTGTTAAAGTGGATGGC
AACGCAACGCAGATGTTCAGTAATTGTTCGTGCCACACCCCGGTTGCCGGTAGCAACGAT
GACATCGGGGTGGCTGGGTCATGTGACCGTGATTGTTCCGCTTCGTTGATTCCGTTCTTG
TTCTGTTTGTTCCTCGTAACCATGGCCACGGTATGCGCGCACACACCTTCACTCATGGTA
ACTTATCGTTGCGTCAGAAACGATGAACGCCCGTTTGCTGCCGGGTTGCAATTCGTGTTT
CTACGAACTTTGGCTTACATCCCGGCCCCAATATACTTTGGTTCAGCCATCGACCAAGCT
TGTCTTTTATGGAAAGGATCCACGGATGAATGTGTGGGCTCCGATGGATCATGTTTGTTA
TACGACGCCGACAAGTTCCGCTCCATTTTCTTCGGGGTGGCGTTCGCTCTAAAGATTGTT
GCATTTTGTTTCGTGTTTATGTCATGGGTGTTGTGTCGTCGTAAACATTCCGAGCACACG
CACACCACCCGGTGGAGACGACACAGAAGAAGAAAGATGCGGGAGAAGAGGGAGGGGAAG
ATGGAACAAGAGGGGAAGATGGGACGGGCCAATAATCCAAATACAATATCAGGGATTACA
GATTCCAGCATCCCTGAGATATATGTTTCGAACCCCCAACCCTTGCCAGTGTTGCCAGAT
ACAAATAATCAAGTGGTTTCCAGTGGAAGTGAAACATCGGTGTGCAGCACTGGAAGCAAA
TCAAGCAACAAACCTTTGATAAAAAACGAACTCGAACTGAAAACTATTTCCACCAATCAG
AAACCAGCCATGAATTCTAGAAGCGAAGATCCCTTGTAACAATCGAGAACAATTAGTTTT
AAACAATCATTTATTGTTAACATAGGCAACAGACCTGGGGTGGCAGGGTAGGCGGGCCGA
CCCCTATATTTTGTACTGCAATAATCAGTAAACATTACAACCAATAAGTTTGTGCGCCCG
ACTACCCCTGCCTCCCCTGTGTTATAAAAACTTTGGTACCCATGAATCGGTTATTTATTA
TTTTTATCATTCCTAAAACAATGAAATACGTTGCGTGCCTTGCCACCATAAAGGCCATAG
TTGTAAATATATCTTTTGTTTTTATCAAGTGCAAATTGTGATTTTTACTAACTTTGATGT
ATCTTGTTTGCCAGTATTACGCACTAATGTCCAATACCTCTGGGTGAGTTCTATGCACTA
CAGAACGAACTTGAAGTTCCTACTTTAATACAGAATAGTGCAACAAA
| PANTHER |
OATP (IPR004156) - T[24-691] 1.1E-223 |
| TIGRFAM |
OATP (IPR004156) - T[35-661] 7.8E-145 |
| SUPERFAMILY |
MFS_trans_sf (IPR036259) - T[47-150] 2.09E-35 - T[189-295] 2.09E-35 - T[334-451] 2.09E-35 - T[549-656] 2.09E-35 |
| ProSiteProfiles |
MFS_dom (IPR020846) - T[48-661] 10.633 |
| CDD |
MFS_dom (IPR020846) - T[56-292] 1.94935E-13 |
| Pfam |
OATP (IPR004156) - T[56-634] 4.6E-163 |
| ProSiteProfiles |
Kazal_dom (IPR002350) - T[467-521] 7.975 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SO3A1_HUMAN | 33.591 % | 346 | 2.83E-108 |
| SO5A1_HUMAN | 39.971 % | 469 | 5.88E-154 |
| SO1C1_HUMAN | 30.152 % | 330 | 4.12E-102 |
