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  1. Transcript 'KH2012:KH.L108.56.v2...'

Transcript Model

Transcript Id

KH2012:KH.L108.56.v2.B.SL7-1

Possible name(s)

DEPDC1; DEPDC1B; DEPDC7

Gene model

KH2012:KH.L108.56

Location

KhL108 [402,503 / 405,489]

Sequences

Amino acid sequence

Length: 419

>KH.L108.56.v2.B.SL7-1
TLQLLRKFLKNHIIEDINGKWGSENLVDDSHLYRQPLSTVNENVNHNRVSKKLKSKIKEP
KNKKETKKQESDRESTCSSGSLTPSPARRFSMRPLPPVPQCKVEPRVLTEQEEDKVWKDI
VLQRIKKSMNLKSLENLMQTQDINGGWVKHNATKVGKSGVVQVSIDEDLPYWALSAMTCL
ANWPNGKDTGLPCYRGFEHDVFKAICDFYCYGRSTTKPTNQSNHSDQHIYSSIKTSEPLL
TYDLYELFTNILCMARPETKEVAIECLQLCLMLLPPSNRRKLHLLLRLMAKVSGNPHLTN
MSKNMPTRVLLLHTFSRHILSCFEEVYLDELLAMRLVTFLIDHHKDVMEVPTGLVDRVNE
KLERLRRPTGTTKARSFNIHISLERTQNLRTLKYSVVQSQLKPSSHLPRAHVPSLMMGM

Nucleotide sequence

Length: 1,280

>KH2012:KH.L108.56.v2.B.SL7-1
ACACTTCAGCTTTTGAGAAAGTTTTTGAAAAACCACATTATTGAAGACATTAACGGTAAA
TGGGGGAGTGAAAACTTGGTGGATGACAGCCATCTTTATAGACAACCACTTTCAACAGTT
AACGAAAACGTCAATCACAACAGAGTTTCAAAAAAATTAAAATCTAAAATAAAAGAACCG
AAGAATAAAAAAGAAACAAAAAAACAAGAAAGCGATCGAGAATCAACGTGCAGTTCCGGT
TCGTTGACTCCCTCCCCGGCCCGCCGCTTCAGCATGCGTCCTCTACCCCCGGTCCCACAA
TGCAAAGTTGAGCCCCGAGTTTTAACGGAGCAAGAAGAGGACAAAGTATGGAAAGACATT
GTTTTGCAGCGAATTAAGAAATCTATGAATTTAAAGTCACTTGAAAATCTTATGCAAACT
CAAGATATTAATGGTGGTTGGGTTAAACACAATGCCACAAAAGTTGGTAAGAGTGGGGTG
GTTCAAGTTTCTATTGATGAAGATCTACCTTACTGGGCTCTAAGTGCAATGACATGTCTC
GCTAATTGGCCGAATGGCAAAGACACAGGCCTTCCCTGCTACAGAGGTTTCGAACATGAC
GTATTTAAAGCGATTTGTGATTTCTATTGCTACGGGCGTTCTACCACGAAACCAACAAAC
CAATCAAATCACTCGGACCAACATATCTACTCATCCATAAAAACGAGCGAACCGTTACTT
ACATATGATCTCTATGAGCTATTCACGAACATCTTATGCATGGCGCGACCGGAAACGAAA
GAGGTTGCCATCGAATGTTTACAACTCTGCCTCATGCTGTTACCACCTAGCAACAGAAGG
AAACTTCATCTGTTGTTAAGATTGATGGCAAAAGTTTCAGGGAATCCTCATCTTACTAAT
ATGAGCAAGAACATGCCTACAAGGGTGTTGCTTCTCCACACATTCTCACGTCACATTCTC
TCCTGCTTTGAAGAGGTTTATCTGGATGAGTTGCTCGCAATGAGACTTGTAACATTTCTT
ATTGACCACCATAAAGATGTCATGGAGGTGCCAACTGGTTTGGTTGACAGAGTGAATGAA
AAATTGGAAAGATTGAGAAGGCCTACGGGGACAACGAAGGCTCGTTCGTTCAATATTCAT
ATTTCCCTGGAACGAACACAAAACTTGCGCACGTTGAAATACTCAGTCGTTCAAAGTCAG
TTGAAGCCATCAAGTCACTTACCACGGGCCCACGTGCCAAGTTTAATGATGGGGATGTGA
AAGAAAAATCTAAACAGTAA

InterProScan

SUPERFAMILY
Rho_GTPase_activation_prot (IPR008936) - T[234-344] 2.55E-13
Gene3D
Rho_GTPase_activation_prot (IPR008936) - T[234-362] 8.6E-14
Pfam
RhoGAP_dom (IPR000198) - T[235-303] 1.8E-7

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
DEP1B_HUMAN 38.366 % 249 1.76E-77
DEP1A_HUMAN 32.171 % 141 2.64E-36