- Transcript 'KH2012:KH.L108.56.v1...'
Transcript Model
Transcript Id
KH2012:KH.L108.56.v1.B.SL1-1
Possible name(s)
DEPDC1; DEPDC1B; DEPDC7
Gene model
Location
KhL108 [401,417 / 405,489]
Amino acid sequence
Length: 508
>KH.L108.56.v1.B.SL1-1
FIKHIRMIKTSNITSDVSNNARKITPGPYRATKLWNEIVHQFRDGMPCRRHRRHLKMYNS
CFPANDAVDFLHEILKSNHNIGKDVTRQQTLQLLRKFLKNHIIEDINGKWGSENLVDDSH
LYRQPLSTVNENVNHNRVSKKLKSKIKEPKNKKETKKQESDRESTCSSGSLTPSPARRFS
MRPLPPVPQCKVEPRVLTEQEEDKVWKDIVLQRIKKSMNLKSLENLMQTQDINGGWVKHN
ATKVGKSGVVQVSIDEDLPYWALSAMTCLANWPNGKDTGLPCYRGFEHDVFKAICDFYCY
GRSTTKPTNQSNHSDQHIYSSIKTSEPLLTYDLYELFTNILCMARPETKEVAIECLQLCL
MLLPPSNRRKLHLLLRLMAKVSGNPHLTNMSKNMPTRVLLLHTFSRHILSCFEEVYLDEL
LAMRLVTFLIDHHKDVMEVPTGLVDRVNEKLERLRRPTGTTKARSFNIHISLERTQNLRT
LKYSVVQSQLKPSSHLPRAHVPSLMMGM
Nucleotide sequence
Length: 1,548
>KH2012:KH.L108.56.v1.B.SL1-1
GTTTATCAAACACATAAGAATGATTAAAACGAGTAATATTACCTCTGATGTTTCGAACAA
CGCAAGAAAAATCACTCCAGGGCCGTATCGTGCCACAAAACTATGGAATGAAATCGTTCA
CCAGTTTCGTGACGGGATGCCATGCCGACGTCATCGGCGTCACCTGAAAATGTACAACTC
CTGCTTCCCCGCCAACGACGCCGTCGACTTTTTGCACGAAATTTTGAAAAGCAATCACAA
TATTGGGAAAGACGTTACACGCCAACAGACACTTCAGCTTTTGAGAAAGTTTTTGAAAAA
CCACATTATTGAAGACATTAACGGTAAATGGGGGAGTGAAAACTTGGTGGATGACAGCCA
TCTTTATAGACAACCACTTTCAACAGTTAACGAAAACGTCAATCACAACAGAGTTTCAAA
AAAATTAAAATCTAAAATAAAAGAACCGAAGAATAAAAAAGAAACAAAAAAACAAGAAAG
CGATCGAGAATCAACGTGCAGTTCCGGTTCGTTGACTCCCTCCCCGGCCCGCCGCTTCAG
CATGCGTCCTCTACCCCCGGTCCCACAATGCAAAGTTGAGCCCCGAGTTTTAACGGAGCA
AGAAGAGGACAAAGTATGGAAAGACATTGTTTTGCAGCGAATTAAGAAATCTATGAATTT
AAAGTCACTTGAAAATCTTATGCAAACTCAAGATATTAATGGTGGTTGGGTTAAACACAA
TGCCACAAAAGTTGGTAAGAGTGGGGTGGTTCAAGTTTCTATTGATGAAGATCTACCTTA
CTGGGCTCTAAGTGCAATGACATGTCTCGCTAATTGGCCGAATGGCAAAGACACAGGCCT
TCCCTGCTACAGAGGTTTCGAACATGACGTATTTAAAGCGATTTGTGATTTCTATTGCTA
CGGGCGTTCTACCACGAAACCAACAAACCAATCAAATCACTCGGACCAACATATCTACTC
ATCCATAAAAACGAGCGAACCGTTACTTACATATGATCTCTATGAGCTATTCACGAACAT
CTTATGCATGGCGCGACCGGAAACGAAAGAGGTTGCCATCGAATGTTTACAACTCTGCCT
CATGCTGTTACCACCTAGCAACAGAAGGAAACTTCATCTGTTGTTAAGATTGATGGCAAA
AGTTTCAGGGAATCCTCATCTTACTAATATGAGCAAGAACATGCCTACAAGGGTGTTGCT
TCTCCACACATTCTCACGTCACATTCTCTCCTGCTTTGAAGAGGTTTATCTGGATGAGTT
GCTCGCAATGAGACTTGTAACATTTCTTATTGACCACCATAAAGATGTCATGGAGGTGCC
AACTGGTTTGGTTGACAGAGTGAATGAAAAATTGGAAAGATTGAGAAGGCCTACGGGGAC
AACGAAGGCTCGTTCGTTCAATATTCATATTTCCCTGGAACGAACACAAAACTTGCGCAC
GTTGAAATACTCAGTCGTTCAAAGTCAGTTGAAGCCATCAAGTCACTTACCACGGGCCCA
CGTGCCAAGTTTAATGATGGGGATGTGAAAGAAAAATCTAAACAGTAA
| Gene3D |
WH-like_DNA-bd_sf (IPR036388) - T[24-125] 1.1E-31 |
| SUPERFAMILY |
WH_DNA-bd_sf (IPR036390) - T[31-135] 8.71E-17 |
| SMART |
DEP_dom (IPR000591) - T[42-126] 2.2E-13 |
| Pfam |
DEP_dom (IPR000591) - T[45-123] 7.3E-13 |
| SUPERFAMILY |
Rho_GTPase_activation_prot (IPR008936) - T[323-433] 3.73E-13 |
| Gene3D |
Rho_GTPase_activation_prot (IPR008936) - T[323-451] 1.2E-13 |
| Pfam |
RhoGAP_dom (IPR000198) - T[324-392] 2.5E-7 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| DEP1B_HUMAN | 40.89 % | 333 | 8.07E-109 |
| DEP1A_HUMAN | 37.309 % | 234 | 1.46E-68 |
