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  1. Transcript 'KH2012:KH.L108.56.v1...'

Transcript Model

Transcript Id

KH2012:KH.L108.56.v1.B.nonSL8-1

Possible name(s)

DEPDC1; DEPDC1B; DEPDC7

Gene model

KH2012:KH.L108.56

Location

KhL108 [401,653 / 405,489]

Sequences

Amino acid sequence

Length: 429

>KH.L108.56.v1.B.nonSL8-1
NIGKDVTRQQTLQLLRKFLKNHIIEDINGKWGSENLVDDSHLYRQPLSTVNENVNHNRVS
KKLKSKIKEPKNKKETKKQESDRESTCSSGSLTPSPARRFSMRPLPPVPQCKVEPRVLTE
QEEDKVWKDIVLQRIKKSMNLKSLENLMQTQDINGGWVKHNATKVGKSGVVQVSIDEDLP
YWALSAMTCLANWPNGKDTGLPCYRGFEHDVFKAICDFYCYGRSTTKPTNQSNHSDQHIY
SSIKTSEPLLTYDLYELFTNILCMARPETKEVAIECLQLCLMLLPPSNRRKLHLLLRLMA
KVSGNPHLTNMSKNMPTRVLLLHTFSRHILSCFEEVYLDELLAMRLVTFLIDHHKDVMEV
PTGLVDRVNEKLERLRRPTGTTKARSFNIHISLERTQNLRTLKYSVVQSQLKPSSHLPRA
HVPSLMMGM

Nucleotide sequence

Length: 1,312

>KH2012:KH.L108.56.v1.B.nonSL8-1
ACAATATTGGGAAAGACGTTACACGCCAACAGACACTTCAGCTTTTGAGAAAGTTTTTGA
AAAACCACATTATTGAAGACATTAACGGTAAATGGGGGAGTGAAAACTTGGTGGATGACA
GCCATCTTTATAGACAACCACTTTCAACAGTTAACGAAAACGTCAATCACAACAGAGTTT
CAAAAAAATTAAAATCTAAAATAAAAGAACCGAAGAATAAAAAAGAAACAAAAAAACAAG
AAAGCGATCGAGAATCAACGTGCAGTTCCGGTTCGTTGACTCCCTCCCCGGCCCGCCGCT
TCAGCATGCGTCCTCTACCCCCGGTCCCACAATGCAAAGTTGAGCCCCGAGTTTTAACGG
AGCAAGAAGAGGACAAAGTATGGAAAGACATTGTTTTGCAGCGAATTAAGAAATCTATGA
ATTTAAAGTCACTTGAAAATCTTATGCAAACTCAAGATATTAATGGTGGTTGGGTTAAAC
ACAATGCCACAAAAGTTGGTAAGAGTGGGGTGGTTCAAGTTTCTATTGATGAAGATCTAC
CTTACTGGGCTCTAAGTGCAATGACATGTCTCGCTAATTGGCCGAATGGCAAAGACACAG
GCCTTCCCTGCTACAGAGGTTTCGAACATGACGTATTTAAAGCGATTTGTGATTTCTATT
GCTACGGGCGTTCTACCACGAAACCAACAAACCAATCAAATCACTCGGACCAACATATCT
ACTCATCCATAAAAACGAGCGAACCGTTACTTACATATGATCTCTATGAGCTATTCACGA
ACATCTTATGCATGGCGCGACCGGAAACGAAAGAGGTTGCCATCGAATGTTTACAACTCT
GCCTCATGCTGTTACCACCTAGCAACAGAAGGAAACTTCATCTGTTGTTAAGATTGATGG
CAAAAGTTTCAGGGAATCCTCATCTTACTAATATGAGCAAGAACATGCCTACAAGGGTGT
TGCTTCTCCACACATTCTCACGTCACATTCTCTCCTGCTTTGAAGAGGTTTATCTGGATG
AGTTGCTCGCAATGAGACTTGTAACATTTCTTATTGACCACCATAAAGATGTCATGGAGG
TGCCAACTGGTTTGGTTGACAGAGTGAATGAAAAATTGGAAAGATTGAGAAGGCCTACGG
GGACAACGAAGGCTCGTTCGTTCAATATTCATATTTCCCTGGAACGAACACAAAACTTGC
GCACGTTGAAATACTCAGTCGTTCAAAGTCAGTTGAAGCCATCAAGTCACTTACCACGGG
CCCACGTGCCAAGTTTAATGATGGGGATGTGAAAGAAAAATCTAAACAGTAA

InterProScan

Gene3D
WH-like_DNA-bd_sf (IPR036388) - T[1-46] 1.5E-6
SUPERFAMILY
Rho_GTPase_activation_prot (IPR008936) - T[244-354] 2.75E-13
Gene3D
Rho_GTPase_activation_prot (IPR008936) - T[244-372] 9.0E-14
Pfam
RhoGAP_dom (IPR000198) - T[245-313] 1.9E-7

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
DEP1B_HUMAN 38.889 % 263 1.19E-82
DEP1A_HUMAN 33.582 % 155 3.0E-41