Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.L108.56.v1.B.nonSL6-1

Possible name(s)

DEPDC1; DEPDC1B; DEPDC7

Gene model

KH2012:KH.L108.56

Location

KhL108 [401,622 / 405,489]

Sequences

Amino acid sequence

Length: 440

>KH.L108.56.v1.B.nonSL6-1
DFLHEILKSNHNIGKDVTRQQTLQLLRKFLKNHIIEDINGKWGSENLVDDSHLYRQPLST
VNENVNHNRVSKKLKSKIKEPKNKKETKKQESDRESTCSSGSLTPSPARRFSMRPLPPVP
QCKVEPRVLTEQEEDKVWKDIVLQRIKKSMNLKSLENLMQTQDINGGWVKHNATKVGKSG
VVQVSIDEDLPYWALSAMTCLANWPNGKDTGLPCYRGFEHDVFKAICDFYCYGRSTTKPT
NQSNHSDQHIYSSIKTSEPLLTYDLYELFTNILCMARPETKEVAIECLQLCLMLLPPSNR
RKLHLLLRLMAKVSGNPHLTNMSKNMPTRVLLLHTFSRHILSCFEEVYLDELLAMRLVTF
LIDHHKDVMEVPTGLVDRVNEKLERLRRPTGTTKARSFNIHISLERTQNLRTLKYSVVQS
QLKPSSHLPRAHVPSLMMGM

Nucleotide sequence

Length: 1,343

>KH2012:KH.L108.56.v1.B.nonSL6-1
GACTTTTTGCACGAAATTTTGAAAAGCAATCACAATATTGGGAAAGACGTTACACGCCAA
CAGACACTTCAGCTTTTGAGAAAGTTTTTGAAAAACCACATTATTGAAGACATTAACGGT
AAATGGGGGAGTGAAAACTTGGTGGATGACAGCCATCTTTATAGACAACCACTTTCAACA
GTTAACGAAAACGTCAATCACAACAGAGTTTCAAAAAAATTAAAATCTAAAATAAAAGAA
CCGAAGAATAAAAAAGAAACAAAAAAACAAGAAAGCGATCGAGAATCAACGTGCAGTTCC
GGTTCGTTGACTCCCTCCCCGGCCCGCCGCTTCAGCATGCGTCCTCTACCCCCGGTCCCA
CAATGCAAAGTTGAGCCCCGAGTTTTAACGGAGCAAGAAGAGGACAAAGTATGGAAAGAC
ATTGTTTTGCAGCGAATTAAGAAATCTATGAATTTAAAGTCACTTGAAAATCTTATGCAA
ACTCAAGATATTAATGGTGGTTGGGTTAAACACAATGCCACAAAAGTTGGTAAGAGTGGG
GTGGTTCAAGTTTCTATTGATGAAGATCTACCTTACTGGGCTCTAAGTGCAATGACATGT
CTCGCTAATTGGCCGAATGGCAAAGACACAGGCCTTCCCTGCTACAGAGGTTTCGAACAT
GACGTATTTAAAGCGATTTGTGATTTCTATTGCTACGGGCGTTCTACCACGAAACCAACA
AACCAATCAAATCACTCGGACCAACATATCTACTCATCCATAAAAACGAGCGAACCGTTA
CTTACATATGATCTCTATGAGCTATTCACGAACATCTTATGCATGGCGCGACCGGAAACG
AAAGAGGTTGCCATCGAATGTTTACAACTCTGCCTCATGCTGTTACCACCTAGCAACAGA
AGGAAACTTCATCTGTTGTTAAGATTGATGGCAAAAGTTTCAGGGAATCCTCATCTTACT
AATATGAGCAAGAACATGCCTACAAGGGTGTTGCTTCTCCACACATTCTCACGTCACATT
CTCTCCTGCTTTGAAGAGGTTTATCTGGATGAGTTGCTCGCAATGAGACTTGTAACATTT
CTTATTGACCACCATAAAGATGTCATGGAGGTGCCAACTGGTTTGGTTGACAGAGTGAAT
GAAAAATTGGAAAGATTGAGAAGGCCTACGGGGACAACGAAGGCTCGTTCGTTCAATATT
CATATTTCCCTGGAACGAACACAAAACTTGCGCACGTTGAAATACTCAGTCGTTCAAAGT
CAGTTGAAGCCATCAAGTCACTTACCACGGGCCCACGTGCCAAGTTTAATGATGGGGATG
TGAAAGAAAAATCTAAACAGTAA

InterProScan

Gene3D	WH-like_DNA-bd_sf (IPR036388) - T[1-57] 1.5E-9
SUPERFAMILY	Rho_GTPase_activation_prot (IPR008936) - T[255-365] 2.94E-13
Gene3D	Rho_GTPase_activation_prot (IPR008936) - T[255-383] 9.4E-14
Pfam	RhoGAP_dom (IPR000198) - T[256-324] 1.9E-7

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
DEP1B_HUMAN	39.059 %	275	2.64E-87
DEP1A_HUMAN	33.692 %	166	1.12E-44