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TRANSCRIPT CARD

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  1. Transcript 'Phfumi.CG.MTP2014.S8...' > 
  2. Transcript 'KH2012:KH.L172.8.v2....' > 
  3. Transcript 'KH2012:KH.S1363.2.v2...' > 
  4. Region 'REG00000549' > 
  5. Transcript 'KH2012:KH.L108.56.v1...'

Transcript Model

Transcript Id

KH2012:KH.L108.56.v1.B.nonSL6-1

Possible name(s)

DEPDC1; DEPDC1B; DEPDC7

Gene model

KH2012:KH.L108.56

Location

KhL108 [401,622 / 405,489]

Sequences

Amino acid sequence

Length: 440

>KH.L108.56.v1.B.nonSL6-1
DFLHEILKSNHNIGKDVTRQQTLQLLRKFLKNHIIEDINGKWGSENLVDDSHLYRQPLST
VNENVNHNRVSKKLKSKIKEPKNKKETKKQESDRESTCSSGSLTPSPARRFSMRPLPPVP
QCKVEPRVLTEQEEDKVWKDIVLQRIKKSMNLKSLENLMQTQDINGGWVKHNATKVGKSG
VVQVSIDEDLPYWALSAMTCLANWPNGKDTGLPCYRGFEHDVFKAICDFYCYGRSTTKPT
NQSNHSDQHIYSSIKTSEPLLTYDLYELFTNILCMARPETKEVAIECLQLCLMLLPPSNR
RKLHLLLRLMAKVSGNPHLTNMSKNMPTRVLLLHTFSRHILSCFEEVYLDELLAMRLVTF
LIDHHKDVMEVPTGLVDRVNEKLERLRRPTGTTKARSFNIHISLERTQNLRTLKYSVVQS
QLKPSSHLPRAHVPSLMMGM

Nucleotide sequence

Length: 1,343

>KH2012:KH.L108.56.v1.B.nonSL6-1
GACTTTTTGCACGAAATTTTGAAAAGCAATCACAATATTGGGAAAGACGTTACACGCCAA
CAGACACTTCAGCTTTTGAGAAAGTTTTTGAAAAACCACATTATTGAAGACATTAACGGT
AAATGGGGGAGTGAAAACTTGGTGGATGACAGCCATCTTTATAGACAACCACTTTCAACA
GTTAACGAAAACGTCAATCACAACAGAGTTTCAAAAAAATTAAAATCTAAAATAAAAGAA
CCGAAGAATAAAAAAGAAACAAAAAAACAAGAAAGCGATCGAGAATCAACGTGCAGTTCC
GGTTCGTTGACTCCCTCCCCGGCCCGCCGCTTCAGCATGCGTCCTCTACCCCCGGTCCCA
CAATGCAAAGTTGAGCCCCGAGTTTTAACGGAGCAAGAAGAGGACAAAGTATGGAAAGAC
ATTGTTTTGCAGCGAATTAAGAAATCTATGAATTTAAAGTCACTTGAAAATCTTATGCAA
ACTCAAGATATTAATGGTGGTTGGGTTAAACACAATGCCACAAAAGTTGGTAAGAGTGGG
GTGGTTCAAGTTTCTATTGATGAAGATCTACCTTACTGGGCTCTAAGTGCAATGACATGT
CTCGCTAATTGGCCGAATGGCAAAGACACAGGCCTTCCCTGCTACAGAGGTTTCGAACAT
GACGTATTTAAAGCGATTTGTGATTTCTATTGCTACGGGCGTTCTACCACGAAACCAACA
AACCAATCAAATCACTCGGACCAACATATCTACTCATCCATAAAAACGAGCGAACCGTTA
CTTACATATGATCTCTATGAGCTATTCACGAACATCTTATGCATGGCGCGACCGGAAACG
AAAGAGGTTGCCATCGAATGTTTACAACTCTGCCTCATGCTGTTACCACCTAGCAACAGA
AGGAAACTTCATCTGTTGTTAAGATTGATGGCAAAAGTTTCAGGGAATCCTCATCTTACT
AATATGAGCAAGAACATGCCTACAAGGGTGTTGCTTCTCCACACATTCTCACGTCACATT
CTCTCCTGCTTTGAAGAGGTTTATCTGGATGAGTTGCTCGCAATGAGACTTGTAACATTT
CTTATTGACCACCATAAAGATGTCATGGAGGTGCCAACTGGTTTGGTTGACAGAGTGAAT
GAAAAATTGGAAAGATTGAGAAGGCCTACGGGGACAACGAAGGCTCGTTCGTTCAATATT
CATATTTCCCTGGAACGAACACAAAACTTGCGCACGTTGAAATACTCAGTCGTTCAAAGT
CAGTTGAAGCCATCAAGTCACTTACCACGGGCCCACGTGCCAAGTTTAATGATGGGGATG
TGAAAGAAAAATCTAAACAGTAA

InterProScan

Gene3D
WH-like_DNA-bd_sf (IPR036388) - T[1-57] 1.5E-9
SUPERFAMILY
Rho_GTPase_activation_prot (IPR008936) - T[255-365] 2.94E-13
Gene3D
Rho_GTPase_activation_prot (IPR008936) - T[255-383] 9.4E-14
Pfam
RhoGAP_dom (IPR000198) - T[256-324] 1.9E-7

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
DEP1B_HUMAN 39.059 % 275 2.64E-87
DEP1A_HUMAN 33.692 % 166 1.12E-44