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  1. Transcript 'KH2012:KH.L108.56.v1...'

Transcript Model

Transcript Id

KH2012:KH.L108.56.v1.B.nonSL5-1

Possible name(s)

DEPDC1; DEPDC1B; DEPDC7

Gene model

KH2012:KH.L108.56

Location

KhL108 [401,619 / 405,489]

Sequences

Amino acid sequence

Length: 441

>KH.L108.56.v1.B.nonSL5-1
VDFLHEILKSNHNIGKDVTRQQTLQLLRKFLKNHIIEDINGKWGSENLVDDSHLYRQPLS
TVNENVNHNRVSKKLKSKIKEPKNKKETKKQESDRESTCSSGSLTPSPARRFSMRPLPPV
PQCKVEPRVLTEQEEDKVWKDIVLQRIKKSMNLKSLENLMQTQDINGGWVKHNATKVGKS
GVVQVSIDEDLPYWALSAMTCLANWPNGKDTGLPCYRGFEHDVFKAICDFYCYGRSTTKP
TNQSNHSDQHIYSSIKTSEPLLTYDLYELFTNILCMARPETKEVAIECLQLCLMLLPPSN
RRKLHLLLRLMAKVSGNPHLTNMSKNMPTRVLLLHTFSRHILSCFEEVYLDELLAMRLVT
FLIDHHKDVMEVPTGLVDRVNEKLERLRRPTGTTKARSFNIHISLERTQNLRTLKYSVVQ
SQLKPSSHLPRAHVPSLMMGM

Nucleotide sequence

Length: 1,346

>KH2012:KH.L108.56.v1.B.nonSL5-1
GTCGACTTTTTGCACGAAATTTTGAAAAGCAATCACAATATTGGGAAAGACGTTACACGC
CAACAGACACTTCAGCTTTTGAGAAAGTTTTTGAAAAACCACATTATTGAAGACATTAAC
GGTAAATGGGGGAGTGAAAACTTGGTGGATGACAGCCATCTTTATAGACAACCACTTTCA
ACAGTTAACGAAAACGTCAATCACAACAGAGTTTCAAAAAAATTAAAATCTAAAATAAAA
GAACCGAAGAATAAAAAAGAAACAAAAAAACAAGAAAGCGATCGAGAATCAACGTGCAGT
TCCGGTTCGTTGACTCCCTCCCCGGCCCGCCGCTTCAGCATGCGTCCTCTACCCCCGGTC
CCACAATGCAAAGTTGAGCCCCGAGTTTTAACGGAGCAAGAAGAGGACAAAGTATGGAAA
GACATTGTTTTGCAGCGAATTAAGAAATCTATGAATTTAAAGTCACTTGAAAATCTTATG
CAAACTCAAGATATTAATGGTGGTTGGGTTAAACACAATGCCACAAAAGTTGGTAAGAGT
GGGGTGGTTCAAGTTTCTATTGATGAAGATCTACCTTACTGGGCTCTAAGTGCAATGACA
TGTCTCGCTAATTGGCCGAATGGCAAAGACACAGGCCTTCCCTGCTACAGAGGTTTCGAA
CATGACGTATTTAAAGCGATTTGTGATTTCTATTGCTACGGGCGTTCTACCACGAAACCA
ACAAACCAATCAAATCACTCGGACCAACATATCTACTCATCCATAAAAACGAGCGAACCG
TTACTTACATATGATCTCTATGAGCTATTCACGAACATCTTATGCATGGCGCGACCGGAA
ACGAAAGAGGTTGCCATCGAATGTTTACAACTCTGCCTCATGCTGTTACCACCTAGCAAC
AGAAGGAAACTTCATCTGTTGTTAAGATTGATGGCAAAAGTTTCAGGGAATCCTCATCTT
ACTAATATGAGCAAGAACATGCCTACAAGGGTGTTGCTTCTCCACACATTCTCACGTCAC
ATTCTCTCCTGCTTTGAAGAGGTTTATCTGGATGAGTTGCTCGCAATGAGACTTGTAACA
TTTCTTATTGACCACCATAAAGATGTCATGGAGGTGCCAACTGGTTTGGTTGACAGAGTG
AATGAAAAATTGGAAAGATTGAGAAGGCCTACGGGGACAACGAAGGCTCGTTCGTTCAAT
ATTCATATTTCCCTGGAACGAACACAAAACTTGCGCACGTTGAAATACTCAGTCGTTCAA
AGTCAGTTGAAGCCATCAAGTCACTTACCACGGGCCCACGTGCCAAGTTTAATGATGGGG
ATGTGAAAGAAAAATCTAAACAGTAA

InterProScan

Gene3D
WH-like_DNA-bd_sf (IPR036388) - T[1-58] 1.9E-10
Gene3D
Rho_GTPase_activation_prot (IPR008936) - T[256-384] 9.4E-14
SUPERFAMILY
Rho_GTPase_activation_prot (IPR008936) - T[256-366] 2.94E-13
Pfam
RhoGAP_dom (IPR000198) - T[257-325] 1.9E-7

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
DEP1B_HUMAN 39.202 % 277 6.65E-88
DEP1A_HUMAN 33.929 % 167 2.85E-45