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  1. Transcript 'KH2012:KH.L108.56.v1...'

Transcript Model

Transcript Id

KH2012:KH.L108.56.v1.B.nonSL4-1

Possible name(s)

DEPDC1; DEPDC1B; DEPDC7

Gene model

KH2012:KH.L108.56

Location

KhL108 [401,635 / 405,489]

Sequences

Amino acid sequence

Length: 435

>KH.L108.56.v1.B.nonSL4-1
ILKSNHNIGKDVTRQQTLQLLRKFLKNHIIEDINGKWGSENLVDDSHLYRQPLSTVNENV
NHNRVSKKLKSKIKEPKNKKETKKQESDRESTCSSGSLTPSPARRFSMRPLPPVPQCKVE
PRVLTEQEEDKVWKDIVLQRIKKSMNLKSLENLMQTQDINGGWVKHNATKVGKSGVVQVS
IDEDLPYWALSAMTCLANWPNGKDTGLPCYRGFEHDVFKAICDFYCYGRSTTKPTNQSNH
SDQHIYSSIKTSEPLLTYDLYELFTNILCMARPETKEVAIECLQLCLMLLPPSNRRKLHL
LLRLMAKVSGNPHLTNMSKNMPTRVLLLHTFSRHILSCFEEVYLDELLAMRLVTFLIDHH
KDVMEVPTGLVDRVNEKLERLRRPTGTTKARSFNIHISLERTQNLRTLKYSVVQSQLKPS
SHLPRAHVPSLMMGM

Nucleotide sequence

Length: 1,330

>KH2012:KH.L108.56.v1.B.nonSL4-1
AAATTTTGAAAAGCAATCACAATATTGGGAAAGACGTTACACGCCAACAGACACTTCAGC
TTTTGAGAAAGTTTTTGAAAAACCACATTATTGAAGACATTAACGGTAAATGGGGGAGTG
AAAACTTGGTGGATGACAGCCATCTTTATAGACAACCACTTTCAACAGTTAACGAAAACG
TCAATCACAACAGAGTTTCAAAAAAATTAAAATCTAAAATAAAAGAACCGAAGAATAAAA
AAGAAACAAAAAAACAAGAAAGCGATCGAGAATCAACGTGCAGTTCCGGTTCGTTGACTC
CCTCCCCGGCCCGCCGCTTCAGCATGCGTCCTCTACCCCCGGTCCCACAATGCAAAGTTG
AGCCCCGAGTTTTAACGGAGCAAGAAGAGGACAAAGTATGGAAAGACATTGTTTTGCAGC
GAATTAAGAAATCTATGAATTTAAAGTCACTTGAAAATCTTATGCAAACTCAAGATATTA
ATGGTGGTTGGGTTAAACACAATGCCACAAAAGTTGGTAAGAGTGGGGTGGTTCAAGTTT
CTATTGATGAAGATCTACCTTACTGGGCTCTAAGTGCAATGACATGTCTCGCTAATTGGC
CGAATGGCAAAGACACAGGCCTTCCCTGCTACAGAGGTTTCGAACATGACGTATTTAAAG
CGATTTGTGATTTCTATTGCTACGGGCGTTCTACCACGAAACCAACAAACCAATCAAATC
ACTCGGACCAACATATCTACTCATCCATAAAAACGAGCGAACCGTTACTTACATATGATC
TCTATGAGCTATTCACGAACATCTTATGCATGGCGCGACCGGAAACGAAAGAGGTTGCCA
TCGAATGTTTACAACTCTGCCTCATGCTGTTACCACCTAGCAACAGAAGGAAACTTCATC
TGTTGTTAAGATTGATGGCAAAAGTTTCAGGGAATCCTCATCTTACTAATATGAGCAAGA
ACATGCCTACAAGGGTGTTGCTTCTCCACACATTCTCACGTCACATTCTCTCCTGCTTTG
AAGAGGTTTATCTGGATGAGTTGCTCGCAATGAGACTTGTAACATTTCTTATTGACCACC
ATAAAGATGTCATGGAGGTGCCAACTGGTTTGGTTGACAGAGTGAATGAAAAATTGGAAA
GATTGAGAAGGCCTACGGGGACAACGAAGGCTCGTTCGTTCAATATTCATATTTCCCTGG
AACGAACACAAAACTTGCGCACGTTGAAATACTCAGTCGTTCAAAGTCAGTTGAAGCCAT
CAAGTCACTTACCACGGGCCCACGTGCCAAGTTTAATGATGGGGATGTGAAAGAAAAATC
TAAACAGTAA

InterProScan

Gene3D
WH-like_DNA-bd_sf (IPR036388) - T[1-52] 7.8E-8
Gene3D
Rho_GTPase_activation_prot (IPR008936) - T[250-378] 9.2E-14
SUPERFAMILY
Rho_GTPase_activation_prot (IPR008936) - T[250-360] 2.75E-13
Pfam
RhoGAP_dom (IPR000198) - T[251-319] 1.9E-7

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
DEP1B_HUMAN 38.571 % 266 8.0E-84
DEP1A_HUMAN 33.577 % 160 7.3E-43