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  1. Transcript 'KH2012:KH.L108.56.v1...'

Transcript Model

Transcript Id

KH2012:KH.L108.56.v1.B.nonSL2-1

Possible name(s)

DEPDC1; DEPDC1B; DEPDC7

Gene model

KH2012:KH.L108.56

Location

KhL108 [401,650 / 405,489]

Sequences

Amino acid sequence

Length: 430

>KH.L108.56.v1.B.nonSL2-1
HNIGKDVTRQQTLQLLRKFLKNHIIEDINGKWGSENLVDDSHLYRQPLSTVNENVNHNRV
SKKLKSKIKEPKNKKETKKQESDRESTCSSGSLTPSPARRFSMRPLPPVPQCKVEPRVLT
EQEEDKVWKDIVLQRIKKSMNLKSLENLMQTQDINGGWVKHNATKVGKSGVVQVSIDEDL
PYWALSAMTCLANWPNGKDTGLPCYRGFEHDVFKAICDFYCYGRSTTKPTNQSNHSDQHI
YSSIKTSEPLLTYDLYELFTNILCMARPETKEVAIECLQLCLMLLPPSNRRKLHLLLRLM
AKVSGNPHLTNMSKNMPTRVLLLHTFSRHILSCFEEVYLDELLAMRLVTFLIDHHKDVME
VPTGLVDRVNEKLERLRRPTGTTKARSFNIHISLERTQNLRTLKYSVVQSQLKPSSHLPR
AHVPSLMMGM

Nucleotide sequence

Length: 1,315

>KH2012:KH.L108.56.v1.B.nonSL2-1
ATCACAATATTGGGAAAGACGTTACACGCCAACAGACACTTCAGCTTTTGAGAAAGTTTT
TGAAAAACCACATTATTGAAGACATTAACGGTAAATGGGGGAGTGAAAACTTGGTGGATG
ACAGCCATCTTTATAGACAACCACTTTCAACAGTTAACGAAAACGTCAATCACAACAGAG
TTTCAAAAAAATTAAAATCTAAAATAAAAGAACCGAAGAATAAAAAAGAAACAAAAAAAC
AAGAAAGCGATCGAGAATCAACGTGCAGTTCCGGTTCGTTGACTCCCTCCCCGGCCCGCC
GCTTCAGCATGCGTCCTCTACCCCCGGTCCCACAATGCAAAGTTGAGCCCCGAGTTTTAA
CGGAGCAAGAAGAGGACAAAGTATGGAAAGACATTGTTTTGCAGCGAATTAAGAAATCTA
TGAATTTAAAGTCACTTGAAAATCTTATGCAAACTCAAGATATTAATGGTGGTTGGGTTA
AACACAATGCCACAAAAGTTGGTAAGAGTGGGGTGGTTCAAGTTTCTATTGATGAAGATC
TACCTTACTGGGCTCTAAGTGCAATGACATGTCTCGCTAATTGGCCGAATGGCAAAGACA
CAGGCCTTCCCTGCTACAGAGGTTTCGAACATGACGTATTTAAAGCGATTTGTGATTTCT
ATTGCTACGGGCGTTCTACCACGAAACCAACAAACCAATCAAATCACTCGGACCAACATA
TCTACTCATCCATAAAAACGAGCGAACCGTTACTTACATATGATCTCTATGAGCTATTCA
CGAACATCTTATGCATGGCGCGACCGGAAACGAAAGAGGTTGCCATCGAATGTTTACAAC
TCTGCCTCATGCTGTTACCACCTAGCAACAGAAGGAAACTTCATCTGTTGTTAAGATTGA
TGGCAAAAGTTTCAGGGAATCCTCATCTTACTAATATGAGCAAGAACATGCCTACAAGGG
TGTTGCTTCTCCACACATTCTCACGTCACATTCTCTCCTGCTTTGAAGAGGTTTATCTGG
ATGAGTTGCTCGCAATGAGACTTGTAACATTTCTTATTGACCACCATAAAGATGTCATGG
AGGTGCCAACTGGTTTGGTTGACAGAGTGAATGAAAAATTGGAAAGATTGAGAAGGCCTA
CGGGGACAACGAAGGCTCGTTCGTTCAATATTCATATTTCCCTGGAACGAACACAAAACT
TGCGCACGTTGAAATACTCAGTCGTTCAAAGTCAGTTGAAGCCATCAAGTCACTTACCAC
GGGCCCACGTGCCAAGTTTAATGATGGGGATGTGAAAGAAAAATCTAAACAGTAA

InterProScan

Gene3D
WH-like_DNA-bd_sf (IPR036388) - T[1-47] 1.0E-6
SUPERFAMILY
Rho_GTPase_activation_prot (IPR008936) - T[245-355] 2.75E-13
Gene3D
Rho_GTPase_activation_prot (IPR008936) - T[245-373] 9.0E-14
Pfam
RhoGAP_dom (IPR000198) - T[246-314] 1.9E-7

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
DEP1B_HUMAN 38.795 % 263 1.05E-82
DEP1A_HUMAN 33.582 % 155 3.28E-41