- Transcript 'KH2012:KH.C14.220.v1...' >
- Transcript 'KH2012:KH.C14.220.v2...' >
- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'Moocul.CG.ELv1_2.S26...' >
- Transcript 'KH2012:KH.L108.28.v1...'
Transcript Model
Transcript Id
KH2012:KH.L108.28.v1.A.SL1-1
Possible name(s)
C1QTNF1; C1QTNF4; C1QTNF6
Gene model
Location
KhL108 [222,945 / 226,523]
Amino acid sequence
Length: 368
>KH.L108.28.v1.A.SL1-1
VVWCTCRYFITMRRPYAIFAVCLVFARELIHASAVNGRDISRRRAEINPEVGLVAFSVAR
SQDLKGHKQTQSAVSFDHEFVNTGGHFNLKQGTFIAPVFGSYEITFSGGGLPHRKMSLLL
MKNNFEVQALAYDGHTRGKPRVQHQNLILELEQDDRIWLKLADGQQYGVSGQRSHSYVTT
FSGHLLQNTELNDVTKRYKRHKRGTNKKKRATVTREVNDVTVGNSQTAIAFSAACRRSVF
GGDVTGKDPSHDVTITYDKIFVNVGNSFNWETGVFTAPTSGVYYFSFTVGKFPKKKLSVS
LMKNDNLFQVMVYNESKSRYREMQSQSVILQLVRGDTVWLKTYNSKEYAVYSNLGSYITF
SGYLIAKV
Nucleotide sequence
Length: 1,901
>KH2012:KH.L108.28.v1.A.SL1-1
GTAGTATGGTGTACGTGTAGGTATTTCATTACAATGAGACGACCTTACGCAATATTTGCA
GTGTGCCTGGTTTTCGCCCGGGAACTTATCCACGCGTCTGCGGTCAACGGACGTGACATT
TCCCGCAGACGAGCCGAGATAAATCCCGAAGTCGGATTGGTGGCGTTTTCAGTAGCAAGG
TCTCAAGATTTGAAAGGACATAAGCAAACGCAATCCGCAGTTTCATTCGACCACGAGTTC
GTGAACACTGGCGGTCATTTCAACTTAAAACAAGGAACATTTATCGCCCCAGTTTTCGGC
TCATATGAAATTACGTTCAGCGGGGGCGGATTACCTCACCGCAAGATGTCGCTGCTGCTC
ATGAAAAATAATTTCGAAGTTCAGGCACTTGCGTATGACGGGCATACGAGGGGAAAACCC
CGGGTGCAACACCAAAATCTAATCCTTGAACTTGAGCAAGACGACAGGATTTGGTTAAAG
TTGGCTGACGGTCAACAATACGGGGTGAGCGGACAACGATCCCATTCTTACGTCACAACC
TTCTCTGGTCATTTGTTGCAAAACACGGAGCTCAATGACGTGACGAAAAGATACAAACGT
CACAAACGAGGAACAAACAAGAAAAAACGAGCAACCGTTACGAGGGAAGTTAATGACGTC
ACAGTAGGTAATTCTCAAACAGCGATCGCTTTCTCCGCGGCTTGTCGAAGAAGCGTGTTT
GGCGGTGACGTCACGGGTAAAGATCCCTCTCATGACGTCACGATCACTTACGACAAAATA
TTTGTAAACGTGGGGAATTCCTTTAATTGGGAAACTGGAGTCTTTACAGCGCCGACCAGC
GGCGTGTATTACTTCAGTTTCACTGTCGGGAAATTCCCCAAGAAGAAACTCTCTGTCTCA
CTCATGAAGAATGACAATTTATTTCAAGTGATGGTATACAATGAAAGCAAGTCTCGTTAC
CGTGAGATGCAAAGTCAGAGTGTCATTCTACAACTGGTACGTGGCGACACCGTGTGGCTG
AAGACTTACAACTCGAAGGAATACGCAGTTTACAGCAATCTCGGAAGCTATATCACTTTT
TCTGGATATTTAATCGCCAAAGTTTGACCACCACACATGGTGTAGGGCGCCAAACCTGGG
GTGGCGGGGTGGTCTGACATACCCTAGAATTTCTGCACTGTATTGATCAGAAAACATTGG
AACCAAATTTATCTCAAAGGAATGCGTGTCTAACTATCCCTGCTCCCCCTGTGTTTTAAA
AGCGACAATGATGGTCTAAATACAGTACACAAGTAATGAGCTGCTGTATTAATGACAATA
TATATAAGTCATTATGACTATATATCTAAAGTCGATAAACCGAAAGTTTTGATTTACTGT
TATGTTATTTGATAATCCACTAACGACAACTCAACAACTCAAAGGCATGAACTAAAGTCA
AAGTAGACAGTTTAAAATGACCTAGAGACTTACATTGTCATCTTTAAATGCTGTTATACT
GTAAACCACCTACAAGTCAACAAATTTAAAAGCTTTCTTTTTACCCTACCTCTTTTTACC
CTGCGAGCCACTTTCATGGCAAAACTACAACCTTTTAAATATTTTAAATTTTAAGTTTCG
AATACAAATACAGCATAGAATGAAATCCTGACAATAAACAGTCGATAAACCGAAAGTTTT
GATTAAATAGTAAATAGTAATACCCCATTTGTATTTGTAGTAATGACACTTACAAAAAGA
ATAACCAACTTTTAAAGCCATTGAACTAAGAAATATGGTCATTTACCACCAAACTACCAG
CCAAGCATGATTACAAGATATATCACTAACTATATATACATATTATGTTTCCCAACTTTT
GTTGCAATATTAGGTGTTCGTACAATTTGTGTATACAGTTT
| SMART |
C1q_dom (IPR001073) - T[47-189] 1.8E-7 - T[222-368] 1.2E-22 |
| ProSiteProfiles |
C1q_dom (IPR001073) - T[49-192] 25.194 - T[224-368] 36.174 |
| Gene3D |
Tumour_necrosis_fac-like_dom (IPR008983) - T[53-202] 4.3E-30 - T[228-368] 6.2E-38 |
| SUPERFAMILY |
Tumour_necrosis_fac-like_dom (IPR008983) - T[54-186] 3.32E-25 - T[228-365] 3.13E-35 |
| Pfam |
C1q_dom (IPR001073) - T[55-186] 7.3E-23 - T[248-365] 5.2E-30 |
| PRINTS |
C1q_dom (IPR001073) - T[248-274] 1.3E-15 - T[275-294] 1.3E-15 - T[322-343] 1.3E-15 - T[356-366] 1.3E-15 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| C1QT6_HUMAN | 38.129 % | 86.3 | 2.57E-19 |
| C1QT4_HUMAN | 40.064 % | 212 | 4.28E-66 |