- Transcript 'KH2012:KH.L18.5.v1.A...' >
- Transcript 'Phmamm.CG.MTP2014.S2...' >
- Transcript 'Cisavi.CG.ENS81.R14....' >
- Transcript 'Cisavi.CG.ENS81.R44....' >
- Transcript 'KH2012:KH.L108.18.v2...'
Transcript Model
Transcript Id
KH2012:KH.L108.18.v2.B.SL6-1
Possible name(s)
GNB3; PWP1; SNRNP40
Gene model
Location
KhL108 [227,747 / 232,003]
Amino acid sequence
Length: 332
>KH.L108.18.v2.B.SL6-1
VQCLSWKPDSTNYLVSGAFDGRVVINDVRGQGSSKWKFKGEIERVVWNVTDPSYFAASTD
SGMVYYCDVRVPKSLFHWRAHEKAIPSMLMTSSALTSSLLYTASSDGRLKMWDLKGNIPK
LIYERNMKMGMVHCMERNPDVLTTFGLGGEKGGIRLWSPSSVFELSEHFPNAENVVATSD
APMAEDDLVMLNSAPDVLDVAGIGKSTEVDVRVTRMPRLKKKILSESNLNGNQKLKIKKS
LKNLSISGENLMESDNTGVVGSECANKKQRMVENCSQIISQTVDTNETADPTVVNDSSNV
KDAQTKRVKSGSAKRRQRRKKTHTRKTALSGN
Nucleotide sequence
Length: 1,011
>KH2012:KH.L108.18.v2.B.SL6-1
GTGCAATGTTTGAGTTGGAAGCCTGACTCGACGAATTACCTCGTATCCGGCGCATTTGAT
GGGCGTGTCGTAATCAATGACGTCAGAGGTCAAGGGTCATCCAAGTGGAAGTTCAAAGGT
GAAATTGAACGAGTGGTTTGGAACGTCACCGATCCTTCATATTTTGCGGCAAGCACTGAT
TCCGGAATGGTATACTATTGTGACGTCAGAGTACCGAAGTCTTTGTTTCACTGGCGAGCT
CACGAGAAAGCGATACCCTCGATGCTCATGACATCATCAGCGCTGACGTCATCACTCCTT
TATACAGCGTCGAGTGATGGAAGATTGAAAATGTGGGATTTGAAAGGAAATATACCGAAG
TTGATATATGAAAGGAATATGAAAATGGGTATGGTCCATTGTATGGAGAGAAACCCTGAT
GTTCTAACTACATTTGGACTTGGTGGGGAAAAAGGAGGGATACGATTATGGAGTCCTAGC
AGTGTTTTTGAATTAAGCGAGCACTTCCCAAACGCTGAGAATGTTGTTGCAACATCCGAT
GCTCCGATGGCAGAAGATGATCTTGTGATGTTGAACTCTGCTCCTGATGTCCTGGATGTT
GCTGGGATCGGGAAGAGCACGGAAGTGGATGTTAGGGTCACAAGGATGCCAAGATTAAAG
AAGAAGATTTTATCAGAATCGAATTTAAACGGAAATCAAAAACTGAAAATCAAAAAATCT
TTGAAAAATCTTTCAATTTCTGGGGAAAATTTAATGGAATCGGACAATACGGGTGTTGTG
GGTTCTGAATGCGCAAATAAGAAGCAAAGAATGGTCGAAAACTGTTCCCAGATTATATCA
CAAACTGTAGATACGAATGAAACAGCTGACCCTACGGTTGTGAATGATAGTTCTAACGTT
AAAGACGCTCAAACTAAAAGAGTTAAATCCGGTAGTGCGAAAAGGCGGCAGCGGCGAAAG
AAAACGCATACACGTAAAACGGCATTAAGTGGAAATTAATAAATTTTATCC
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[1-161] 1.83E-22 |
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[1-175] 2.6E-23 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[1-167] 11.524 |
| SMART |
WD40_repeat (IPR001680) - T[29-68] 85.0 - T[71-113] 0.23 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[78-115] 9.706 |
| ProSitePatterns |
WD40_repeat_CS (IPR019775) - T[100-114] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PWP1_HUMAN | 38.674 % | 136 | 2.73E-36 |