- Molecular Tool 'pFOG::Delta2' >
- Transcript 'Boleac.CG.SB_v3.S241...' >
- Transcript 'KH2012:KH.L106.16.v1...'
Transcript Model
Transcript Id
KH2012:KH.L106.16.v1.A.SL1-1
Possible name(s)
BMP10; GDF2; NODAL
Gene model
Location
KhL106 [35,269 / 37,584]
Amino acid sequence
Length: 426
>KH.L106.16.v1.A.SL1-1
LKPEVTKYSINMISMFNIAAFVFTMTSIFVNGESVTSSNPTNAEALLRHMQQRSNAVRSK
YMMELYRAKNTGMPTNNALKRSDIVRSFRSIESYKVGSKLVVVFDLSSVPRERIRGSELQ
VDRSLSDVTMIELWEGINAESRRKIGTMRYIRTNKSFDTTSQIRRWHRGDSPVTPFHASG
AILPLTPLLVVYSNNHHYDLIEASESRMNRQRRSSRGRHSNKYRKRRYRVNKNKTRKSTL
RHNDVEITSHAQQKSRRISNDFELSTSSADDVTIQSGNEYDVTDEWRKQQSDDVKVVKAK
HPVSPQRKHPFIISTPAPTVGATHCRKVSFEIDFEKIGWGSWIVYPKKYNAYRCEGQCRT
PMRSDSKPTNHAYMQSIIATKRPDLHIPQPCCVPTKLKPLSILYYEDGEVKQRDHEDMVV
DECGCR
Nucleotide sequence
Length: 1,356
>KH2012:KH.L106.16.v1.A.SL1-1
ATTTGAAACCGGAAGTTACAAAATATTCGATAAATATGATTTCTATGTTTAATATCGCTG
CTTTCGTCTTCACTATGACGTCAATATTTGTCAATGGAGAATCCGTGACGTCATCAAACC
CAACAAACGCCGAAGCATTGTTACGTCACATGCAACAAAGGAGTAACGCTGTTCGATCGA
AATACATGATGGAATTGTACCGAGCCAAAAACACAGGAATGCCAACCAACAACGCGTTGA
AAAGATCCGATATTGTTAGAAGCTTCAGATCAATCGAAAGTTACAAAGTTGGTTCAAAGT
TGGTCGTCGTGTTCGACCTTTCATCCGTCCCACGTGAGCGAATCAGAGGGTCAGAATTAC
AAGTGGATAGAAGCCTCAGTGACGTCACAATGATAGAATTATGGGAAGGTATAAACGCTG
AATCGCGTCGTAAGATTGGAACAATGAGATATATTCGAACGAACAAGAGTTTCGACACAA
CTTCTCAAATAAGAAGATGGCACCGCGGTGATTCCCCCGTCACCCCCTTCCACGCATCGG
GGGCCATCTTACCCCTCACCCCATTGTTGGTCGTGTATTCTAACAATCACCATTATGACC
TCATAGAAGCGTCGGAATCGCGAATGAACCGACAACGACGATCGTCACGTGGTCGACACT
CCAACAAATACCGGAAACGACGTTATCGAGTGAATAAGAACAAAACCCGCAAGTCAACGT
TGCGTCACAATGACGTAGAGATAACATCACACGCCCAGCAAAAGTCGCGAAGAATTTCCA
ACGATTTCGAACTTTCTACGTCATCAGCTGATGACGTCACAATCCAAAGTGGCAACGAGT
ATGACGTAACAGATGAATGGCGAAAGCAACAAAGTGATGACGTCAAAGTAGTGAAAGCGA
AACACCCGGTGTCGCCGCAGAGAAAACATCCTTTCATTATTTCGACCCCGGCACCCACGG
TTGGGGCCACACATTGTAGGAAAGTGAGTTTCGAGATTGACTTTGAGAAGATAGGTTGGG
GTTCATGGATTGTTTACCCCAAGAAATACAACGCGTATAGATGCGAGGGGCAATGTAGGA
CACCTATGAGGAGTGACAGCAAACCAACCAACCACGCTTATATGCAAAGTATCATCGCAA
CCAAACGCCCCGACCTTCACATACCTCAACCATGTTGTGTGCCAACCAAACTTAAACCGC
TCAGTATATTATATTATGAAGATGGAGAAGTTAAACAAAGAGATCACGAAGACATGGTCG
TCGACGAATGCGGTTGCAGATAATTTACATTGATTGTTTTATTATTACGTCATAAAGTTC
CAATTGTTTCGCTTTTCTTATGCAATAAACACAAAA
| PANTHER |
TGF-beta-rel (IPR015615) - T[14-426] 1.3E-119 |
| ProSiteProfiles |
TGF-b_C (IPR001839) - T[304-426] 35.325 |
| Gene3D |
Cystine-knot_cytokine (IPR029034) - T[318-426] 7.2E-36 |
| SUPERFAMILY |
Cystine-knot_cytokine (IPR029034) - T[323-426] 4.26E-35 |
| Pfam |
TGF-b_C (IPR001839) - T[324-425] 2.3E-31 |
| SMART |
TGF-b_C (IPR001839) - T[325-426] 3.5E-54 |
| ProSitePatterns |
TGFb_CS (IPR017948) - T[343-358] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| NODAL_HUMAN | 56.436 % | 140 | 3.47E-38 |
| GDF2_HUMAN | 46.729 % | 115 | 2.04E-28 |
| BMP10_HUMAN | 27.708 % | 117 | 5.29E-29 |