- Transcript 'Phfumi.CG.MTP2014.S1...' >
- Clone 'man28l22' >
- Clone 'csga087p21' >
- Transcript 'KH2012:KH.C9.9.v2.A....' >
- Transcript 'KH2012:KH.C9.9.v3.A....'
Transcript Model
Transcript Id
KH2012:KH.C9.9.v3.A.ND4-1
Possible name(s)
ACADL; ACADS; IVD
Gene model
Location
KhC9 [5,353,971 / 5,356,995]
Amino acid sequence
Length: 454
>KH.C9.9.v3.A.ND4-1
FNGMKDVCESVLRGSKILKGCRQFYPQVLRSVSMKLRPGQINRLFSTSSAAASEFRKEGF
QSGRFTDIGTRQIFNEDHDMFRESVRKFYQEEVLPYHDQWEEEGQVSRELWLKAGDMGIL
GVNTPEEHGGIGGDWLSAAIVHEEQGYVNCSGPGFALHSDIVMRYITKYGTPEQIEKYIP
DMTAGKKIGAIAMTEPGAGSDLQGVRTFAKKDGDDWVLNGSKVFITNGWMADVVIVVAIT
DKEAKSAAHGISLFLVDGDNPGFIKGKKLKKMGLRAQDTAELFFEDCRLPSSALLGGKAG
LNAGFYQLMQELPQERLLISNLCMAACEFMFEETRDYVKQRKAFGKTLSKLQTIKHTLAE
IKTETAVARGFLDRCNDLHNQRKLDTSTASMAKYYVTDLNNTVAYRCVQLHGGWGYMWEY
PICKAYVDARVQTIYGGSNEIMKELISRDIEKDV
Nucleotide sequence
Length: 1,682
>KH2012:KH.C9.9.v3.A.ND4-1
AAGTTTACGGTACCATTACAGAGCAGTTTCACCAGAACCTCGTAGTTTAATGGGATGAAA
GATGTTTGTGAATCTGTTTTACGCGGCAGTAAGATACTAAAAGGATGTCGGCAGTTTTAC
CCCCAAGTGTTGCGATCTGTGTCAATGAAGCTCCGTCCCGGCCAGATAAACCGTCTCTTC
AGCACTTCGTCTGCTGCAGCTTCAGAATTTAGAAAAGAAGGATTTCAAAGCGGGAGATTT
ACTGATATTGGAACAAGGCAAATTTTCAATGAAGATCACGATATGTTCCGAGAGTCGGTG
AGAAAGTTCTACCAAGAGGAAGTTTTGCCCTATCATGACCAATGGGAAGAAGAAGGCCAA
GTAAGCAGGGAACTGTGGCTTAAAGCTGGGGATATGGGGATCCTGGGGGTTAATACACCA
GAGGAACATGGTGGAATTGGTGGTGATTGGTTATCTGCTGCTATAGTACATGAAGAACAA
GGTTACGTCAATTGCTCGGGTCCAGGTTTTGCTCTGCACTCTGATATAGTGATGCGGTAC
ATCACAAAGTACGGAACGCCGGAACAAATTGAGAAATATATTCCTGACATGACTGCTGGC
AAGAAAATTGGTGCAATTGCGATGACTGAACCTGGTGCTGGTAGCGATTTACAGGGTGTT
CGTACTTTTGCGAAGAAAGATGGTGATGACTGGGTTCTAAATGGAAGTAAAGTGTTTATC
ACAAACGGTTGGATGGCAGATGTCGTTATTGTCGTTGCTATCACGGATAAAGAAGCAAAA
TCTGCAGCTCATGGAATAAGTCTTTTCCTTGTAGATGGTGATAACCCAGGATTTATCAAG
GGAAAGAAATTGAAGAAAATGGGACTCAGAGCACAGGACACAGCAGAACTGTTTTTCGAA
GACTGTCGCTTACCTTCAAGTGCATTACTGGGTGGAAAAGCAGGTCTGAACGCCGGGTTT
TACCAGTTAATGCAGGAATTGCCCCAAGAACGACTTCTCATCAGCAACTTATGCATGGCT
GCATGTGAATTCATGTTCGAGGAGACGAGAGATTACGTGAAGCAGAGAAAAGCTTTTGGG
AAAACTCTCTCCAAGCTGCAGACAATCAAGCACACTTTGGCTGAAATTAAAACAGAGACT
GCAGTTGCAAGGGGATTCTTGGATCGTTGCAATGATCTTCATAACCAGAGGAAGCTTGAC
ACGTCAACTGCATCCATGGCAAAGTATTACGTTACTGACCTCAACAACACTGTAGCTTAC
AGATGCGTGCAGTTGCATGGTGGTTGGGGTTACATGTGGGAATACCCCATCTGCAAAGCG
TATGTTGACGCACGTGTTCAAACCATCTATGGTGGCAGCAACGAAATTATGAAGGAGCTT
ATTTCTCGAGATATTGAAAAGGATGTGTAGCTGCCTGTTCTTCCTATAATGACAATTTAA
TTCCTTTCCGTTTAATTTAATTCTATCGACGTTGTATATATTATTTTCCAAAATTTTTGA
AACGTTGTTCAAATTTCTTGTTTATTTGAAAAGAAAATAGTTCCAATTTTCAATTCTAAC
TTGAGATTGTTTACAGTTTGTTGTTGAGTGCATGCGAGAAAGTAAATATTGATAATATAG
ATTTGGTGTGTCAAAGGTTTTTGTTATGTCAAAATAAAATATCTTTGTTTGTCATAAAGA
AA
| Gene3D |
AcylCoA_DH/ox_N_sf (IPR037069) - T[51-188] 6.5E-36 |
| SUPERFAMILY |
AcylCoA_DH/oxidase_NM_dom (IPR009100) - T[72-314] 1.44E-83 |
| Pfam |
AcylCoA_DH/ox_N (IPR013786) - T[75-185] 1.7E-32 |
| Pfam |
Acyl-CoA_Oxase/DH_cen-dom (IPR006091) - T[190-287] 4.3E-27 |
| ProSitePatterns |
Acyl-CoA_DH_CS (IPR006089) - T[192-204] . - T[409-428] . |
| SUPERFAMILY |
AcylCo_DH-like_C (IPR036250) - T[301-450] 2.09E-43 |
| Pfam |
AcylCo_DH/oxidase_C (IPR009075) - T[302-449] 1.1E-36 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ACADS_HUMAN | 35.638 % | 236 | 1.62E-73 |
| IVD_HUMAN | 32.115 % | 226 | 1.26E-69 |
| ACADL_HUMAN | 67.16 % | 575 | 0 |