- Transcript 'KH2012:KH.C9.9.v1.A....' >
- Transcript 'KH2012:KH.C9.9.v2.A....' >
- Transcript 'KH2012:KH.C9.9.v1.A....' >
- Transcript 'KH2012:KH.C5.58.v2.A...' >
- Transcript 'KH2012:KH.C9.9.v2.A....'
Transcript Model
Transcript Id
KH2012:KH.C9.9.v2.A.ND1-1
Possible name(s)
ACADL; ACADS; IVD
Gene model
Location
KhC9 [5,350,399 / 5,356,995]
Amino acid sequence
Length: 474
>KH.C9.9.v2.A.ND1-1
PSRNEPTISESCRTTCISFLRRFASAVSHLSVEPAWKPEGCRQFYPQVLRSVSMKLRPGQ
INRLFSTSSAAASEFRKEGFQSGRFTDIGTRQIFNEDHDMFRESVRKFYQEEVLPYHDQW
EEEGQVSRELWLKAGDMGILGVNTPEEHGGIGGDWLSAAIVHEEQGYVNCSGPGFALHSD
IVMRYITKYGTPEQIEKYIPDMTAGKKIGAIAMTEPGAGSDLQGVRTFAKKDGDDWVLNG
SKVFITNGWMADVVIVVAITDKEAKSAAHGISLFLVDGDNPGFIKGKKLKKMGLRAQDTA
ELFFEDCRLPSSALLGGKAGLNAGFYQLMQELPQERLLISNLCMAACEFMFEETRDYVKQ
RKAFGKTLSKLQTIKHTLAEIKTETAVARGFLDRCNDLHNQRKLDTSTASMAKYYVTDLN
NTVAYRCVQLHGGWGYMWEYPICKAYVDARVQTIYGGSNEIMKELISRDIEKDV
Nucleotide sequence
Length: 1,785
>KH2012:KH.C9.9.v2.A.ND1-1
GAATATGGTATTATTGAGTTGCTAGTGTAAGTTTGGTGACTAAATAAGTTTTAGTTTTGT
GAATTGCTTACCAGTATGTGGTACGTAGCCAAGTAGGAACGAACCCACTATAAGTGAAAG
TTGTAGAACTACTTGCATCTCTTTCTTGCGTCGTTTTGCTTCGGCTGTGTCGCATTTATC
AGTAGAACCAGCTTGGAAGCCTGAAGGATGTCGGCAGTTTTACCCCCAAGTGTTGCGATC
TGTGTCAATGAAGCTCCGTCCCGGCCAGATAAACCGTCTCTTCAGCACTTCGTCTGCTGC
AGCTTCAGAATTTAGAAAAGAAGGATTTCAAAGCGGGAGATTTACTGATATTGGAACAAG
GCAAATTTTCAATGAAGATCACGATATGTTCCGAGAGTCGGTGAGAAAGTTCTACCAAGA
GGAAGTTTTGCCCTATCATGACCAATGGGAAGAAGAAGGCCAAGTAAGCAGGGAACTGTG
GCTTAAAGCTGGGGATATGGGGATCCTGGGGGTTAATACACCAGAGGAACATGGTGGAAT
TGGTGGTGATTGGTTATCTGCTGCTATAGTACATGAAGAACAAGGTTACGTCAATTGCTC
GGGTCCAGGTTTTGCTCTGCACTCTGATATAGTGATGCGGTACATCACAAAGTACGGAAC
GCCGGAACAAATTGAGAAATATATTCCTGACATGACTGCTGGCAAGAAAATTGGTGCAAT
TGCGATGACTGAACCTGGTGCTGGTAGCGATTTACAGGGTGTTCGTACTTTTGCGAAGAA
AGATGGTGATGACTGGGTTCTAAATGGAAGTAAAGTGTTTATCACAAACGGTTGGATGGC
AGATGTCGTTATTGTCGTTGCTATCACGGATAAAGAAGCAAAATCTGCAGCTCATGGAAT
AAGTCTTTTCCTTGTAGATGGTGATAACCCAGGATTTATCAAGGGAAAGAAATTGAAGAA
AATGGGACTCAGAGCACAGGACACAGCAGAACTGTTTTTCGAAGACTGTCGCTTACCTTC
AAGTGCATTACTGGGTGGAAAAGCAGGTCTGAACGCCGGGTTTTACCAGTTAATGCAGGA
ATTGCCCCAAGAACGACTTCTCATCAGCAACTTATGCATGGCTGCATGTGAATTCATGTT
CGAGGAGACGAGAGATTACGTGAAGCAGAGAAAAGCTTTTGGGAAAACTCTCTCCAAGCT
GCAGACAATCAAGCACACTTTGGCTGAAATTAAAACAGAGACTGCAGTTGCAAGGGGATT
CTTGGATCGTTGCAATGATCTTCATAACCAGAGGAAGCTTGACACGTCAACTGCATCCAT
GGCAAAGTATTACGTTACTGACCTCAACAACACTGTAGCTTACAGATGCGTGCAGTTGCA
TGGTGGTTGGGGTTACATGTGGGAATACCCCATCTGCAAAGCGTATGTTGACGCACGTGT
TCAAACCATCTATGGTGGCAGCAACGAAATTATGAAGGAGCTTATTTCTCGAGATATTGA
AAAGGATGTGTAGCTGCCTGTTCTTCCTATAATGACAATTTAATTCCTTTCCGTTTAATT
TAATTCTATCGACGTTGTATATATTATTTTCCAAAATTTTTGAAACGTTGTTCAAATTTC
TTGTTTATTTGAAAAGAAAATAGTTCCAATTTTCAATTCTAACTTGAGATTGTTTACAGT
TTGTTGTTGAGTGCATGCGAGAAAGTAAATATTGATAATATAGATTTGGTGTGTCAAAGG
TTTTTGTTATGTCAAAATAAAATATCTTTGTTTGTCATAAAGAAA
| Gene3D |
AcylCoA_DH/ox_N_sf (IPR037069) - T[71-208] 7.0E-36 |
| SUPERFAMILY |
AcylCoA_DH/oxidase_NM_dom (IPR009100) - T[92-334] 1.7E-83 |
| Pfam |
AcylCoA_DH/ox_N (IPR013786) - T[95-205] 1.9E-32 |
| Pfam |
Acyl-CoA_Oxase/DH_cen-dom (IPR006091) - T[210-307] 4.6E-27 |
| ProSitePatterns |
Acyl-CoA_DH_CS (IPR006089) - T[212-224] . - T[429-448] . |
| SUPERFAMILY |
AcylCo_DH-like_C (IPR036250) - T[321-470] 2.26E-43 |
| Pfam |
AcylCo_DH/oxidase_C (IPR009075) - T[322-469] 1.2E-36 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ACADS_HUMAN | 35.829 % | 236 | 3.46E-73 |
| IVD_HUMAN | 32.115 % | 227 | 1.73E-69 |
| ACADL_HUMAN | 67.16 % | 575 | 0 |