- Transcript 'KH2012:KH.C9.881.v1....'
Transcript Model
Transcript Id
KH2012:KH.C9.881.v1.A.nonSL2-1
Possible name(s)
SQSTM1
Gene model
Location
KhC9 [4,673,409 / 4,676,459]
Amino acid sequence
Length: 352
>KH.C9.881.v1.A.nonSL2-1
KLSKKDMAMQYKAFLYTDHPNRAKEIRRFVVDHDVASSYEYLRRKVSTVFPNLGEDNFAL
QWQDNEGDIIWLNSDEELLQALGQSTEDIFKLYIKESSTSQSQEKKPDFCQYQQQFQGFP
PWGNGGWNRRGRGGRCPQWGPPPFAQMPGFFAAGQFGPCFGPPPQQAPKPSKDDKQSTSD
DKPTSSNNQSQSQNTPNQFNGEEYLQNVGKAVSDFLHPFEIDVDIDVKTPGGKDGSSNKP
TSGAEDPSASEEGGSDGKKKETESSGSEEMEWTFVKKNKTCGKEGKPDDKPDNKPASTET
PDDNPRLAESLTQLLAMGFNNDGGWLANLLCACDYDISRALDKMQPARGSRE
Nucleotide sequence
Length: 1,632
>KH2012:KH.C9.881.v1.A.nonSL2-1
AAATTATCAAAAAAAGACATGGCAATGCAATACAAAGCGTTCCTGTACACTGATCATCCA
AACAGAGCAAAGGAAATCAGAAGATTTGTCGTGGACCATGATGTGGCTTCAAGTTATGAA
TATTTAAGACGAAAGGTTTCCACAGTTTTCCCGAACTTGGGCGAGGACAACTTTGCCCTC
CAGTGGCAAGATAATGAGGGCGACATCATCTGGTTAAATTCTGACGAGGAGTTGCTTCAA
GCTCTCGGTCAATCTACCGAAGATATTTTCAAGCTTTATATTAAGGAAAGCTCCACTTCT
CAATCCCAGGAAAAGAAACCAGATTTCTGTCAATATCAACAGCAGTTCCAAGGTTTTCCA
CCATGGGGTAATGGGGGTTGGAATAGACGGGGCAGGGGTGGACGATGCCCACAGTGGGGC
CCACCACCCTTTGCACAGATGCCAGGTTTCTTTGCCGCTGGTCAATTTGGACCTTGTTTT
GGTCCACCTCCACAACAAGCCCCCAAACCATCTAAGGACGACAAACAATCAACTTCCGAT
GACAAACCAACTTCATCAAACAACCAATCTCAATCCCAGAACACACCCAACCAATTCAAT
GGTGAGGAATATTTGCAGAACGTTGGGAAAGCAGTTTCCGACTTCCTTCATCCGTTCGAG
ATAGATGTTGACATCGATGTAAAAACTCCGGGTGGGAAAGATGGATCTTCGAATAAACCA
ACATCCGGAGCCGAGGATCCTTCTGCATCCGAGGAAGGAGGATCGGATGGAAAGAAGAAA
GAGACGGAGTCTAGTGGAAGTGAAGAAATGGAGTGGACATTTGTAAAAAAAAATAAAACT
TGTGGAAAAGAGGGCAAACCAGACGACAAACCAGACAACAAACCAGCTTCAACTGAAACA
CCGGATGATAACCCACGACTTGCTGAATCATTAACCCAACTCCTTGCAATGGGTTTTAAC
AATGATGGTGGGTGGTTGGCTAACCTTCTATGTGCTTGTGATTATGATATAAGTCGTGCT
CTCGATAAAATGCAACCAGCACGTGGCAGTAGAGAGTAGAGCATGTTTGTTTAAATCATT
TTATCTTTATGTATATATCATGTTATGTATATATATGGTGTAACAGTTTTAAGGCTCCCT
CTTTTTGAAATGATGTAACAGTTTTAGATCGTAAAATAATGTTATCTGGTGATGGTTTAA
TAAGTTTAAAGTTCTTTTTTCAAATATTATTTAACACTCAGTATTCCATTTTAAAATCGT
TTTTAACGTACAGTACTGTGGGGTAAGATGGATAGCATAAGCACATTATATCTCCTCTTT
TCCAATCATGTTTTTATAAATTAACATCGCTCTTTTAGAGTCTTGAAGATATGGTTAATT
AATTCTATAAATATTCTTTGTTTACTACCAAATGGGAAGATCAAAAGAATAAAAACATGG
ACCATCTTACCCCAACCTACTATATGAGAACAATTTTATTTTTGGGTGTTTTAAAATGAT
TTTTTTTTTCAAATTTTATTGGCCTATTCTGTAATGATTTATTATGTACATGAACCTTGT
GTTTACATTTGCTGGTGTGTGAGTGTCAATATATAATCATGTATCAATAAAACTTCATGT
TACAAGCAAAAA
| SMART |
PB1_dom (IPR000270) - T[8-97] 1.9E-7 |
| ProSiteProfiles |
PB1_dom (IPR000270) - T[8-97] 17.488 |
| Pfam |
PB1_dom (IPR000270) - T[25-93] 2.0E-10 |
| Pfam |
SQSTM_UBA (IPR033741) - T[301-345] 1.6E-13 |
| SUPERFAMILY |
UBA-like_sf (IPR009060) - T[301-347] 5.1E-13 |
| CDD |
SQSTM_UBA (IPR033741) - T[306-345] 5.39888E-18 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SQSTM_HUMAN | 24.091 % | 95.5 | 8.66E-22 |