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- Transcript 'KH2012:KH.C9.872.v1....'
Transcript Model
Transcript Id
KH2012:KH.C9.872.v1.A.SL1-1
Possible name(s)
ATOH1; ATOH8; NEUROD4
Gene model
Location
KhC9 [879,977 / 883,966]
Amino acid sequence
Length: 875
>KH.C9.872.v1.A.SL1-1
LFYDVKYMTLLDVTSPAMTSAPPSLKSNILQHYDVNKTSCDVMPACVTSFNINNEAYKSE
FRNGTPDSSPDLDFRFNPKFSFRKSNGEQPMLRHHDVKTDTSSSETSNRNNSNNQVDIES
LDEMSRNGSDSGGSPPATVGKRSQPPKKRKLFREAEADVTSDGSAADTSPSAFKPRPPRA
ANSSEILRQMYAAFGSPGGVAEHLTRFHKNLDESVTNGRSPATDTQQHRHRIQTESSKRS
SDENREIKSQSSNPQPPSISYAHKKRRIAHEPNHGSSFHIHDTSRHEKRDVPNESRGFRA
YSRKDHYGDSRSSRDDDEPNEILQNNHKNSPSRKRHISQEMKITKRPRGNSPGSPEPQVT
NPFMDYYRTNPYSTPYNPLMFHPSLAAFGLPSIPFVPQLPHPGAVGSAPNPLLYSGNPYL
PNPLLLREMLTQQSGVASALHGGLSVPPMPQMSLEQLQALQSMPFLTHGMLGGGLYPPNL
SQTLNNSYLLGAKDPKTRHQRLTEPHRTPDSYPQSPTNRLSTSQYPKIQKPRAAIPSTSI
HSPSITDPRKLSTEESTVQIPVLGDKHYKKSPKDKRDKQLCKTSKLTSNKQAKPDTHKVE
RRNSEKSKPKPIQERVTTNIPPALPTPSDNETVNPVPVSRPRSPLAIPGLPMHGKPASYK
NLTRERRLVANARERTRVHTISSAFDELRTQIPSYSCNQKLSKLAILRIACSYIRTLSVL
SGRDETTTFDQGVDQCTRVLQAESRARSRRKTNKAQIEWEMTNYERHNRQTSIDGDVTTK
RHKESTEVSRDSCPKTKEPISDRQHVETCSSKSTVAMDDDDVEHIDVTDVDDVVAPNDVF
DDVTNKPSRCDVDALQDNVFDPKEKKSECNVSSNE
Nucleotide sequence
Length: 2,790
>KH2012:KH.C9.872.v1.A.SL1-1
ATATGCAGTGTAGTTAAAAGTGTAGTTGTTTTATGACGTCAAATACATGACGCTTTTGGA
CGTGACGTCACCTGCTATGACATCAGCACCGCCTTCGTTAAAATCAAATATTCTTCAACA
TTACGACGTGAACAAAACCTCTTGTGACGTAATGCCTGCCTGTGTTACGTCATTTAACAT
TAACAATGAAGCTTACAAATCCGAATTCAGAAACGGGACGCCCGATTCGAGCCCTGATCT
TGACTTTCGATTCAACCCAAAGTTTTCGTTTCGAAAATCGAACGGTGAACAACCTATGTT
ACGTCATCATGACGTCAAAACCGATACGTCATCATCGGAAACATCGAACAGGAACAACAG
CAACAATCAGGTCGACATTGAATCTTTGGATGAGATGTCAAGGAATGGTAGCGATTCAGG
GGGCTCTCCGCCAGCAACCGTGGGAAAAAGAAGCCAACCTCCGAAAAAACGAAAACTCTT
CCGGGAAGCTGAAGCCGATGTGACATCCGATGGCTCAGCAGCAGATACAAGCCCTTCTGC
ATTCAAGCCACGCCCCCCACGAGCAGCAAATTCAAGCGAAATATTGCGTCAGATGTACGC
CGCTTTCGGTTCACCAGGTGGCGTGGCAGAGCACCTGACACGCTTCCACAAGAATTTGGA
TGAATCTGTAACAAATGGGAGATCCCCCGCAACCGATACTCAGCAACATAGACATCGTAT
TCAAACCGAATCAAGCAAAAGATCTTCAGATGAAAATAGAGAAATTAAATCACAAAGTTC
AAACCCACAACCCCCGAGCATAAGTTATGCCCACAAGAAAAGAAGGATTGCTCACGAACC
AAATCACGGATCAAGTTTTCATATTCATGACACATCACGTCATGAAAAACGTGATGTTCC
AAACGAATCACGAGGGTTCCGAGCTTACTCGCGAAAAGACCATTATGGTGACTCACGATC
TTCACGTGATGACGATGAACCAAACGAAATACTGCAAAACAATCACAAAAACTCACCATC
ACGAAAACGTCATATTTCACAAGAAATGAAGATCACGAAAAGGCCGCGGGGAAACTCCCC
TGGATCCCCTGAACCCCAGGTCACCAACCCATTCATGGATTACTACAGAACCAACCCATA
TTCGACCCCATATAACCCACTTATGTTTCACCCATCTTTAGCAGCTTTTGGGTTACCAAG
TATCCCCTTTGTGCCCCAATTACCCCACCCAGGAGCCGTAGGATCAGCTCCTAACCCCCT
ATTATATAGCGGAAACCCCTACCTCCCCAACCCTTTACTTCTACGTGAGATGTTGACCCA
GCAGAGTGGCGTGGCGTCTGCACTCCATGGCGGCTTGTCAGTGCCACCCATGCCACAGAT
GTCACTTGAGCAACTTCAAGCCCTTCAAAGCATGCCATTCTTAACTCATGGTATGCTAGG
CGGCGGGCTATACCCCCCTAATCTATCCCAAACCCTTAACAACTCTTACCTACTGGGCGC
TAAAGATCCAAAGACTAGACATCAGCGGCTTACTGAACCCCACCGAACCCCCGATAGTTA
CCCTCAATCACCAACAAACAGACTTTCCACTTCCCAATATCCGAAGATTCAAAAACCAAG
AGCAGCCATTCCATCCACTTCCATTCACTCCCCATCTATTACCGATCCACGAAAACTGTC
AACCGAAGAATCAACGGTTCAAATCCCAGTGTTGGGAGACAAGCATTACAAGAAATCACC
GAAAGACAAACGAGACAAACAGCTTTGCAAAACAAGCAAACTAACTTCCAACAAACAGGC
AAAACCTGACACTCATAAAGTTGAACGACGAAACTCAGAAAAATCGAAACCTAAACCAAT
TCAAGAACGCGTAACCACTAATATTCCACCCGCCCTGCCAACACCATCCGATAATGAAAC
TGTGAATCCGGTCCCCGTGTCGAGACCAAGAAGTCCGCTCGCAATCCCCGGGCTTCCGAT
GCATGGAAAGCCCGCCAGTTACAAGAATCTCACCCGAGAGCGACGTTTGGTCGCCAACGC
TCGCGAACGAACACGAGTTCACACCATTAGTTCCGCCTTCGATGAGCTTCGAACCCAGAT
ACCAAGTTACTCATGCAACCAAAAGTTATCCAAACTTGCAATCTTAAGAATCGCTTGTTC
TTATATCCGAACGTTGTCAGTATTGTCTGGTCGTGACGAAACCACCACCTTTGATCAGGG
TGTGGACCAATGCACACGTGTGTTGCAGGCTGAAAGTCGCGCTCGAAGTCGAAGGAAAAC
CAACAAAGCTCAGATTGAGTGGGAGATGACAAACTATGAACGTCATAATCGACAAACGTC
AATCGATGGTGACGTCACAACAAAACGTCATAAAGAATCCACTGAGGTGTCACGTGATTC
GTGCCCTAAGACAAAAGAACCAATCAGCGACCGCCAACACGTCGAAACCTGTAGTTCAAA
ATCTACTGTTGCTATGGACGATGATGACGTCGAACATATTGACGTCACTGATGTTGATGA
CGTAGTTGCCCCGAATGACGTATTTGATGACGTTACGAATAAACCTTCTCGCTGTGACGT
AGACGCGTTACAAGATAATGTATTTGATCCCAAGGAGAAAAAATCGGAGTGTAACGTGTC
GTCCAATGAATGACGTCACATTTCTACGTGACCTAACGCAGTGAACTTTCCGTCCAATTC
TGCTTCCTATTCCAATCAACCATGCAATTATTACGTCATCAAGTTCCTTTGTTACGACTT
TGCAATATTTTCAATAAAGCTGCTCCTGTT
| PANTHER |
ATOH8 (IPR032660) - T[96-295] 5.7E-68 - T[568-763] 5.7E-68 |
| Gene3D |
HLH_DNA-bd_sf (IPR036638) - T[661-728] 2.3E-19 |
| SUPERFAMILY |
HLH_DNA-bd_sf (IPR036638) - T[663-722] 4.06E-16 |
| CDD |
bHLH_dom (IPR011598) - T[664-720] 1.09971E-15 |
| ProSiteProfiles |
bHLH_dom (IPR011598) - T[665-717] 15.453 |
| Pfam |
bHLH_dom (IPR011598) - T[666-717] 4.2E-15 |
| SMART |
bHLH_dom (IPR011598) - T[671-723] 3.7E-13 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ATOH8_HUMAN | 57.732 % | 110 | 3.07E-26 |