- Transcript 'KH2012:KH.C9.751.v1....'
Transcript Model
Transcript Id
KH2012:KH.C9.751.v1.B.ND1-1
Possible name(s)
OBSCN; SPEG; TRIO
Gene model
Location
KhC9 [35,961 / 55,766]
Amino acid sequence
Length: 750
>KH.C9.751.v1.B.ND1-1
FVLPTTFDPNIDDVITQHDDITISNYSSSSDEMLTADSGGETPVPQLDSDDDDVIKPLLF
VSGVRDVSATIGTNVELSCTVECQPTPRVIWYKNNQKIPQTEKVANRFLTEIKRENKNQF
KISLTVHDVKPDDGGEYMMAVTTAGGNLFSSGSLIIGSSLDSKPHAKYELMREIPSSVKY
SSPQTGTPKVFPPSFDDITDDVECNIGDSATFRVTVLGNPPPVVSWYKDNVLLNEGEIER
IDEGNQHSIIIHDVTHERSGIYSCTASSIAGHVTCKAELEAKLEPDWSKSDETSLQISKR
RFKDNYKVDDIIGRGVISLVKRATHRVTNHTVAAKFIQNKHKDHITAQNEIDILTKCQHN
HIVKFYESFTTSRHMIIVTEICKIELFEFFVTSQSFCEAMVSRYMKQLCEAISYLHRNNI
LHLNVKPENILLDENSTLKLINFGSAHRMNEDSVIYWNRGTPEFVAPEVVTSCQVTTGTD
MWSVGVVTYLALTGVSPFAGETDQMTLFRIRDFDEKLNFKHFHQISESGKDFVSMLIVMS
QSSRLSADDVINHEWMASSVEKKLETERLKYFQSRRKWQVYVELIINFQRSLLTGKSTLT
IRSMTSLLHGEYGSTSLAVPRHVIDDVTSSTTVTESEDEEPPLVQVSFEEKVDIVTSSDD
NVFDDVIKEPQENNESKQHHLVGRSEPETKRKKKTNTRVVRHRSFDVPVSSSDEETSEVR
GKEGVSHHVTPHKSPSVFDQAENLGSGCFT
Nucleotide sequence
Length: 4,770
>KH2012:KH.C9.751.v1.B.ND1-1
CACCTTCATCGCGGGCAAGTGACGTCACTAAACGTATCGGTGACCGGCCAACCGGAACCG
AAGATCACGTGGTTCAAGGACGGCCAGCCATTGGACGAGAACGCGATTGAAATCGACCAA
TCAGAGCCGGCCAGTGGAGTTTACTCATGCGTGGCCACAAACAACCGTGGGGTGGCGACC
ACGAGTGCTTGCGTCACAATCAAACATCCGATGAAGAGGGTTCAATTCGGGGAGGAATTA
ACTCGATCATATGATGAACCCATGCAAGATTATCTTTTATACCAAGAACCTCCAACACAG
GAACCTCTTGACTGCTCCCTAGTGGATTATCTTCGCAACAAAGCCGACAGTCTTCCGTTC
CACCATAGACATCGTATATCATTCAACGAAAGTGCCGACTCGGGGGATGACTCAGCTACT
TTTTCAGAGGACAATTCATTGTCTCATGATTATGACATCACAAGGCGATTCTCAATTGTT
TCGTTCAGCAGCGTTTCATCGGCAGCTTACGTGACAGCAGATGAAGCAGGATCCGAAACC
ACGCTTGATTATTTTTCACCAAACGAAGATTTGATTTCCGCTGACGATTTCTTCAGCCCT
GATTCGGAACATTATTTATCACAGGGAGATTTACGAATGAAATCTTTACCTCCACCAAGT
GATGATAATTTGTTCTGCCCACGACCTTTGACCCCAACATTGATGATGTCATCACCCAAC
ATGATGACATCACCATTTCAAATTACAGCTCCTCCTCGGATGAAATGTTGACGGCCGACA
GCGGAGGGGAAACCCCTGTTCCGCAACTCGATAGTGACGATGATGATGTCATAAAGCCAC
TATTGTTTGTGAGTGGAGTGCGTGATGTTTCAGCGACGATTGGCACGAATGTGGAGTTGT
CATGCACCGTGGAGTGCCAACCAACACCACGGGTCATTTGGTATAAAAATAATCAAAAAA
TCCCCCAAACAGAGAAAGTTGCCAACAGGTTTTTGACGGAAATCAAACGAGAAAATAAAA
ACCAGTTCAAGATATCGTTGACCGTACACGATGTAAAACCAGATGATGGAGGGGAATATA
TGATGGCTGTCACTACAGCAGGTGGCAACTTGTTCTCATCAGGAAGTTTGATTATAGGGA
GTTCCTTGGATTCGAAACCTCATGCTAAATATGAACTGATGAGGGAAATCCCTTCAAGTG
TAAAATACAGTTCCCCACAAACTGGAACTCCAAAAGTGTTTCCCCCCTCCTTTGATGACA
TCACAGATGACGTTGAATGCAACATTGGCGACTCAGCAACTTTTCGAGTTACTGTGTTGG
GAAATCCCCCACCGGTAGTTTCCTGGTACAAGGATAACGTTTTGTTGAACGAAGGCGAAA
TTGAAAGAATCGACGAAGGCAACCAACACAGCATCATCATTCACGATGTCACGCATGAAC
GATCGGGTATTTACTCATGCACGGCGTCGAGCATCGCTGGTCATGTGACCTGTAAAGCTG
AGTTGGAGGCCAAGCTTGAACCTGATTGGTCGAAATCTGATGAAACTTCCCTCCAAATTT
CAAAACGAAGATTCAAAGATAATTACAAGGTAGATGACATCATCGGTCGTGGGGTGATTT
CCCTCGTTAAGCGAGCAACTCATCGTGTAACGAACCACACGGTGGCAGCAAAGTTTATAC
AGAACAAACATAAAGATCATATAACTGCTCAAAACGAAATTGACATTTTAACAAAGTGTC
AGCACAATCACATTGTGAAATTCTACGAAAGTTTCACGACTTCTCGCCACATGATCATTG
TCACCGAAATTTGTAAAATTGAATTGTTTGAGTTCTTTGTGACATCACAATCCTTCTGTG
AAGCAATGGTATCACGATACATGAAACAACTTTGTGAAGCAATATCGTATCTACATAGAA
ACAATATACTTCATCTTAATGTTAAACCCGAGAATATTTTACTCGATGAAAATTCAACTT
TAAAGTTGATTAACTTTGGAAGCGCTCATCGTATGAATGAGGATTCTGTTATTTATTGGA
ATCGCGGAACTCCAGAGTTTGTGGCTCCGGAAGTTGTAACCTCGTGCCAAGTGACAACCG
GCACTGACATGTGGAGTGTGGGGGTTGTCACTTATCTGGCATTAACAGGGGTTTCCCCCT
TTGCGGGAGAAACAGACCAAATGACGTTGTTTCGGATCCGTGATTTTGACGAAAAACTAA
ATTTTAAACATTTTCATCAAATCTCGGAAAGTGGAAAAGATTTTGTATCGATGTTGATTG
TGATGTCACAATCCTCCCGATTGTCTGCTGATGATGTCATAAACCATGAATGGATGGCAT
CATCAGTTGAGAAGAAACTTGAAACAGAACGTTTGAAATATTTTCAATCAAGGAGGAAAT
GGCAGGTTTATGTTGAACTTATCATTAATTTTCAGCGTTCGTTGCTCACCGGTAAGTCAA
CCCTCACAATCCGCTCTATGACATCACTATTACATGGGGAGTATGGTTCCACCTCATTGG
CCGTACCTCGTCATGTGATCGATGATGTCACTTCCTCTACGACCGTTACCGAGTCCGAGG
ATGAAGAGCCCCCACTGGTGCAAGTGAGTTTTGAGGAAAAAGTTGACATTGTGACATCAT
CGGATGACAATGTGTTTGATGATGTCATAAAGGAACCACAAGAAAACAATGAGTCGAAAC
AGCATCACCTAGTGGGAAGATCGGAGCCAGAGACGAAGAGAAAAAAGAAAACAAACACTC
GTGTCGTGCGTCATCGATCATTTGACGTACCCGTGTCCTCGTCTGATGAGGAAACGAGTG
AAGTTAGGGGTAAAGAGGGGGTTTCCCATCATGTAACCCCACACAAGTCCCCCTCGGTGT
TCGATCAAGCGGAGAATTTGGGGTCGGGCTGCTTCACTTGACAGCGAGCATGGGGGAATA
CCCAAACCAAGAAAGGGGATTTTAAAGAAGGGGAATTCCACAGATTCAGAAACTTCTGGA
AACCAGAAGTTTCGTCCCTTAAAGACGGGAGATGAGAAATATCCCGATGTTGGAAACTAC
AAAAGAAAAGTTATTCGTAAAGTGAATACTCTGCCGGGCTCTGGTGCGCCACCTAGCAGC
CCTCTTTCTTCCATATCTTCCGTCACAAGGAGGCGCCAGATGATGGTCCGAGGATTGTCG
GTTGATTCAGCAATCCGACCCTCGATGGTAAAGGGAGGGTTACGGGGGCCATTGTTTGAA
CAACGACATCATAATGATGATAGTGATGTCACAACAGCAGGGGCGATGATGCGAGGAAGT
CCGCTTCAAAATAGAAGTTTTTCTCCACTGAGGGGAAACACCCCCGACCCCCCAATAATA
TCCCGAGTCGTGGGGGCCGATGTTTGGGTCAGGTGGTCACCTTCCCATTGTGACTCAGCA
CAAATAAGCTACCGTTTGGAAATGCAAAGTCATGGTTCATCCTCGTGGAAAATTGTTGCT
GAAAACATCAAATCAACCTCCTATCATGTGATCGGGCTAGATCGTCGTTTGTCGTATGTT
TTCCGTGTCGCTGCCACCACTAGTGGGCAATATGGAGTGTTCAGTCAACCGTCACAGAAT
GTTTCGTTCATGAAGAAAAGATAAAAGTGTCATCAATCACCTTTGTGATGTCATCATCAA
ACGTTTTTCAGAGAAAAGATAACAGCTGTATCTGTCTTCCTGATGTCATTATCAAACTTC
TTCGTGGTGTCATTATCAAACTTCTTTATGATGTCATTGTGATATCAAGAAACTCAAGAC
TGAAAAAAACAATAAAAGTTTTTGCAAAAGCTGGGATTCCTTGGACATTGGGTGTTAAAA
GGTGTAATAAATATAGTTAGAACCAATTGTTTATTTATTATTTTACATTTTCAAGCAACA
TTTTACATAAACGTGATTTATTCGTTCATTACATTCATTAATATGATTGTTTTAGTTTGT
TTATTATTTGTTTTATTTCGTTTCATTTTTAAATTTTCAAAAATTGTCGACTCATCAGTA
AATTGATGACGTAACAGTAGAGTGTAAACAAACATATGACGTAACAATGCTCATTATTAT
TCACATTGTCGACTTCATAAACCTTGTTTATATTTGAATTGCTCCAACCCAGTGGTCACT
AATGGATTGTATAAATTGTCAGCCAAACCAAAATCAATCATCAACAAAGTTACATACATG
GTAACTCGTAAGCGAGCACGTGTTAAACCCGTGTAATAAGGGCTGTCGTTGCCCCGACAT
AAAGTTAAAGTTAATTCAATTCACAAACTAAATAGACGTCGCCCTACTACACTTGTATAT
TGGTCACCAAATATGACCCCTATGTTGAATGAATGAACAAAACACGACATGTCATTTATA
TGACGTCGTATTTCTCCTTGTGCATGTGTTGCGCTTTCAATTATTGTCATTTTTATTAAA
AATCGCTCAAAAATGTAAAATACACGTTCATAGTTGTGGTTGTTTCTTGGATTTGAAAGT
ATTATTATGCTGTTACCATTGATGCTGTATGTGTCCTTGAGCGTAAAACAACAATTGATC
CAACTCAGTGGTCAGTAATAGGTTGTTAGCCATTTATAGTTGCCCAAATGACTAATGAGG
TGTAATGCAATAAGGTAACCGTGTTATAAGGATGATTGTTGCCCCGCAGCATCAGGATAA
ATTAACTACATTCATACAAAAAGTTATGTAATGGCTTTGTAAATATGAGTAATAATAAAT
GGTCAAGTATATATGATTTCTATGTAAAAG
| Gene3D |
Ig-like_fold (IPR013783) - T[51-157] 6.7E-16 - T[186-282] 8.9E-19 |
| ProSiteProfiles |
Ig-like_dom (IPR007110) - T[57-155] 10.099 - T[193-280] 9.609 |
| SUPERFAMILY |
Ig-like_dom_sf (IPR036179) - T[60-156] 6.2E-15 - T[190-285] 1.21E-19 |
| Pfam |
Ig_I-set (IPR013098) - T[61-154] 1.2E-12 - T[193-280] 1.8E-18 |
| SMART |
Ig_sub (IPR003599) - T[64-157] 4.6E-7 - T[199-282] 6.3E-7 |
| SMART |
Ig_sub2 (IPR003598) - T[70-145] 3.0E-5 - T[205-271] 1.4E-6 |
| SUPERFAMILY |
Kinase-like_dom_sf (IPR011009) - T[298-579] 2.32E-74 |
| ProSiteProfiles |
Prot_kinase_dom (IPR000719) - T[306-556] 39.778 |
| Pfam |
Prot_kinase_dom (IPR000719) - T[306-556] 3.4E-63 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TRIO_HUMAN | 32.918 % | 191 | 1.86E-50 |
| OBSCN_HUMAN | 33.051 % | 265 | 6.1E-75 |
| SPEG_HUMAN | 35.455 % | 282 | 1.03E-80 |
