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TRANSCRIPT CARD

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  1. Transcript 'Boleac.CG.SB_v3.S516...' > 
  2. Transcript 'Harore.CG.MTP2014.S2...' > 
  3. Transcript 'KH2012:KH.C5.184.v2....' > 
  4. Transcript 'Cisavi.CG.ENS81.R3.3...' > 
  5. Transcript 'KH2012:KH.C9.543.v1....'

Transcript Model

Transcript Id

KH2012:KH.C9.543.v1.A.SL1-1

Possible name(s)

DES; PRPH; VIM

Gene model

KH2012:KH.C9.543

Location

KhC9 [4,228,359 / 4,233,628]

Sequences

Amino acid sequence

Length: 457

>KH.C9.543.v1.A.SL1-1
QLSIIKLCPLFINTQSKVMASKQGRSSYRNTFGSQTAYSTAGSKGYSKSFVMEEPIAAKR
VSYSYSASSSGGGATGANLDLGGLKLNEKETLNGINNRFASYIEKVRYLEEQNSKLEKRI
REASARKTVDLGEDKLQKLRRLRAQVDEATLAKVRSEIARDNLRGEASEIKWKLEHEGRL
RSELDDELGRLRKDVDDATMVRVDLERKIETLREELEYGKKLHAEEIDDLKAQVRDQGVN
VEVDGIAPDVAELLRQIRAQYESIVLKNKDEAEQWYKNKFEDLEERAKVNVEDMEKVRAD
INDYRKQVTQLEMELESLRGTNDYLERNLADVEKRYEVEAARYQSRVAQLGSEFDHAQGE
MKRHLAEYKRLMSVKISLEKEILTYRRLLEGEEKRVSSSSSSSDDDDEAYQTKTTKKVIV
KTIETRDGKIVSSSISEKQLLEDKSDSSSSSSSSDEE

Nucleotide sequence

Length: 1,987

>KH2012:KH.C9.543.v1.A.SL1-1
ACCAACTGTCTATCATAAAACTTTGCCCTTTATTCATTAACACCCAATCGAAAGTCATGG
CATCCAAGCAGGGACGATCCAGCTACAGGAACACATTCGGAAGCCAAACAGCTTATTCTA
CTGCTGGTTCCAAGGGTTATTCCAAAAGCTTTGTAATGGAAGAACCAATCGCAGCAAAGC
GAGTGTCTTATTCTTATTCTGCATCTTCCAGCGGCGGAGGTGCTACTGGGGCCAACTTAG
ACCTCGGCGGTTTGAAACTGAATGAAAAAGAGACCCTAAACGGCATCAACAACCGGTTTG
CTTCTTACATTGAAAAAGTCCGTTACTTGGAGGAACAGAATTCAAAACTTGAGAAGAGAA
TCCGAGAGGCAAGCGCCCGAAAGACGGTTGATCTTGGAGAAGATAAACTTCAAAAACTGA
GGCGTTTGAGAGCTCAAGTTGATGAAGCTACACTTGCAAAGGTTCGCTCCGAAATTGCTC
GAGACAACTTAAGAGGGGAAGCGTCTGAGATCAAATGGAAATTGGAACATGAAGGCCGAC
TTCGTTCTGAACTTGATGACGAATTGGGAAGACTTCGTAAGGATGTTGATGACGCAACAA
TGGTGCGCGTTGATCTGGAACGAAAGATCGAAACCCTCAGAGAGGAACTTGAATATGGAA
AGAAACTTCACGCAGAGGAGATTGATGACTTGAAAGCACAAGTTAGAGATCAAGGAGTCA
ACGTGGAAGTTGACGGGATCGCTCCGGATGTTGCCGAGCTTCTCCGACAGATCCGCGCTC
AATACGAATCCATTGTCCTCAAGAATAAAGATGAGGCAGAGCAATGGTACAAGAACAAGT
TTGAGGACTTGGAAGAAAGGGCGAAGGTTAACGTTGAAGACATGGAGAAGGTTCGTGCTG
ACATCAACGATTACAGAAAACAAGTCACTCAGCTTGAAATGGAGCTTGAGTCGCTCAGAG
GAACGAACGACTACCTCGAACGAAATTTGGCCGACGTGGAAAAACGCTACGAGGTTGAAG
CAGCTCGTTACCAGAGCAGGGTAGCTCAACTTGGATCAGAGTTCGATCATGCACAAGGGG
AAATGAAACGACACTTGGCTGAATACAAACGATTAATGAGCGTCAAGATTTCTCTGGAGA
AAGAGATTTTGACATACAGACGCTTGCTGGAAGGCGAAGAGAAGAGAGTTTCTTCGAGCA
GTTCTAGCAGCGATGACGACGACGAAGCATACCAGACCAAAACAACGAAAAAAGTTATAG
TAAAAACCATAGAGACCAGAGATGGAAAGATTGTATCTTCTTCCATTTCGGAGAAACAAC
TTTTGGAGGACAAATCTGATTCGTCCAGCTCATCCTCATCCAGTGACGAAGAGTAAAATA
GGAAACGGTGTTGATAGAAACCGCAAGCGGTACAACTTTGCGACTAATTACTGCCGTAGT
ATTTGTAGATCCTGTATCCTTGTAGCGATTTAATTGTAACCACATAACTATATATATTAT
TAGGGGCCGAATAGAGCAAAGCTGCTTAGGTTTCGGTGCAACAAAACAAGCTTAACACGA
TTCTTGCGCTTTTCTGTCTTACCTAACACGGCTCTCGCGACTTTTACTGACATTCGTTCC
AACAAATTGTTGTGCAGTTTTATTCATAACCCATTGTACAGTGCTCATTGCATTCCTACA
AGACATAATTCTACGAAACTATTCCATCCCTGTTGCAACAGTTTCTTGCATGTAACTTGA
TAACAATTTGTACAAATTGTACAGATATTACTACAGCACGCCAGTGAGATTAACAGTAGT
AGGTAAATCTTGTACTTTTAATCAACAATTGTAGAGGATTATGCATCCTATTTGAGTCCG
CTGTTATCTATAACTCTCTTTTTCAAGGCGTTATAAAAGTTTCACATGTCTACTTCGACT
AAGAGATTGTATATTTGTAAAATGTGCATATACCAATTGCAAATAAATACGACAAGAGGT
GAAAAAA

InterProScan

PANTHER
IF (IPR001664) - T[31-450] 1.7E-96
SMART
IF (IPR001664) - T[87-395] 1.7E-119
Pfam
IF (IPR001664) - T[87-395] 2.1E-87
PRINTS
Keratin_I (IPR002957) - T[184-207] 4.5E-6 - T[310-325] 4.5E-6 - T[336-362] 4.5E-6
ProSitePatterns
Intermediate_filament_CS (IPR018039) - T[382-390] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
VIME_HUMAN 41.081 % 278 7.64E-89
GFAP_HUMAN 37.965 % 268 1.17E-85
DESM_HUMAN 36.287 % 259 1.04E-81