- Transcript 'KH2012:KH.C9.478.v1....'
Transcript Model
Transcript Id
KH2012:KH.C9.478.v1.A.ND1-1
Possible name(s)
SYT2; SYT5; SYT9
Gene model
Location
KhC9 [5,114,321 / 5,117,526]
Amino acid sequence
Length: 336
>KH.C9.478.v1.A.ND1-1
LQMINTPSVDSTEAEADTPMIHFDVSYNGDLEVLNVKLIQARNLATQDFSGTSDPYCTVA
LVPGFNPRRSKVHKKTSNPEFGESFVFSVSSDNLEDKVLQVKTYDFDQFSRDECTGVMEL
NLKEIDFVMTPNIDLWRKMKFPDDHETSETFGDLMLALSYLRSAEKLTVAVQKARNLKEP
ESRKGLPDPYVKVALYKGKQRIKKKKTDTIHSTCNPVFNQALTFSVPFDTLQAADTKLIC
HVVHDFKLGYNEDLGQVEIGPNCMDSEERRHWSEMMAQHINRPIARWHHLKQPSPPTQRL
STDENLPSSSGRRKSFAVPEALQLHGLADVSRRSFS
Nucleotide sequence
Length: 1,537
>KH2012:KH.C9.478.v1.A.ND1-1
TTACAAATGATAAACACACCAAGTGTGGACTCGACAGAAGCAGAGGCAGATACGCCAATG
ATTCATTTTGATGTTTCATACAATGGCGACCTAGAAGTATTGAACGTTAAACTTATCCAG
GCCCGGAATCTTGCCACTCAAGATTTCAGCGGAACTTCCGACCCTTACTGTACCGTTGCA
CTGGTGCCCGGGTTCAATCCACGGAGGAGCAAAGTTCATAAAAAGACATCGAACCCGGAA
TTTGGAGAAAGCTTTGTCTTTAGTGTTTCAAGCGACAATTTGGAGGATAAAGTGCTTCAG
GTGAAAACGTACGATTTCGACCAGTTTTCCAGAGACGAATGCACTGGTGTTATGGAACTT
AACCTAAAAGAAATTGATTTTGTGATGACACCCAACATTGACCTCTGGCGGAAAATGAAA
TTTCCCGACGACCACGAAACCAGCGAAACGTTCGGAGACTTAATGCTTGCCTTGTCATAT
CTCCGCAGTGCTGAGAAACTCACTGTTGCTGTCCAGAAAGCGAGAAATTTAAAAGAACCC
GAGTCAAGAAAGGGATTACCAGATCCATACGTTAAGGTCGCTCTTTACAAAGGGAAGCAA
CGAATAAAGAAAAAGAAAACGGACACAATCCATTCAACGTGTAACCCCGTTTTTAACCAA
GCTCTCACGTTTAGTGTTCCATTCGACACTCTACAAGCGGCTGATACGAAGCTAATTTGT
CACGTGGTGCATGATTTTAAACTCGGTTACAACGAAGACTTAGGACAAGTGGAAATAGGA
CCAAACTGCATGGACAGCGAGGAACGCCGCCATTGGTCAGAAATGATGGCGCAACATATC
AACCGACCAATAGCAAGATGGCACCACTTAAAACAACCCAGCCCTCCTACACAACGACTC
TCAACCGACGAAAACCTCCCCAGTTCATCGGGTCGAAGGAAATCCTTTGCGGTCCCGGAG
GCTCTTCAGTTACATGGGCTAGCGGATGTTAGTCGAAGATCCTTTAGTTAGAAACTGACC
GCAAGATATTCCAGCCATAAGCCATTCAATAAGACATCAGTCCTTGGAAGCTTAAGGTAT
AGAGAACCCCAGACTCACAACAAAACCGCTATACGCAATCTCAGTGTTCCAAACCCGGAG
TATTTAATATATTTCGCAAAACTTGATAGTATGTAGGCGTATGGCGGACGAAACGTCGGT
GTTTTAAGATCACAAAACAAACAATTGTCGAAAGATCTTTTTTGACTTAGGAACATTACC
AATTGATGTCGAATGAGACCCACTTAACACTGTAGCGGTTTATCCTTGCGTAATTCACCG
ATTGTCAGAGTCGAAATGCTGAATCAGCCATTAAGATATTCTCATTGAAATTTCTGTGTT
TTGCGCTCTCTTTTTTTTGCAGACTGAATTGTTTTGTAATCGATATTTTGCACATTACTA
CCTACTGCGCTGCCAGATAGTCGCAGTTCAGTTCGCAATCTTTTTGTTTCGTAATCGCAG
AGTTTTGGTCGATTTGCAACATGTCAGCGTACAATAT
| Gene3D |
C2_domain_sf (IPR035892) - T[8-143] 1.0E-30 - T[144-295] 3.0E-36 |
| SMART |
C2_dom (IPR000008) - T[33-134] 1.3E-15 - T[166-273] 1.3E-15 |
| Pfam |
C2_dom (IPR000008) - T[34-127] 4.4E-19 - T[166-273] 1.4E-17 |
| ProSiteProfiles |
C2_dom (IPR000008) - T[34-119] 15.459 - T[164-258] 14.778 |
| PRINTS |
C2_dom (IPR000008) - T[49-61] 1.1E-5 - T[75-88] 1.1E-5 - T[99-107] 1.1E-5 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SYT9_HUMAN | 39.781 % | 179 | 2.39E-52 |
| SYT2_HUMAN | 38.603 % | 176 | 1.05E-51 |
| SYT5_HUMAN | 38.909 % | 162 | 9.04E-47 |
