- Transcript 'KH2012:KH.C9.476.v2....'
Transcript Model
Transcript Id
KH2012:KH.C9.476.v2.A.SL2-1
Possible name(s)
CTGF; CYR61; NOV
Gene model
Location
KhC9 [5,873,853 / 5,880,135]
Amino acid sequence
Length: 328
>KH.C9.476.v2.A.SL2-1
EAKSTKLFLVSSHTVTRSREKQTNSSVSKSWCRNLHRINIITQPSYYKRKDLHSWQIISL
RFETQATMAISRKLCRLLVITTLTGMVFSLCPYECMCRDEPTHCPVAVSLVTDGCNCCKV
CAKQTGEECNDQEKVCDPHRDLFCDYSGSRSGDWGVCRAARREQRSRTRGHSSCDVHTSA
WSPCSKSCGLGVSVRVSNDNPRCQLGRDMRLCQLRPCQGNRYGPKKGRHCMRQKRARKRE
TLTYAGCTSVRKSRPRYCGGCHGPSRCCTPKSTRTISVQFQCTDGSLFSKKMMVIRSCSC
HSNCSPNVVHREVFQYALHNDMHQATAR
Nucleotide sequence
Length: 1,709
>KH2012:KH.C9.476.v2.A.SL2-1
CAGCGATAATTTGTTTCACATTTACTGATCACAAACTGTATTACTTAAACATTTACCTGT
CTCGTGGTGAGAACCACTAAACCATCGTTGAGAAGCAAAGTCGACCAAGCTATTTCTCGT
CTCTTCACACACAGTGACACGAAGCCGCGAAAAGCAAACAAATTCAAGTGTTTCGAAATC
CTGGTGTAGAAATCTGCATAGAATAAATATTATTACACAACCAAGTTATTACAAGAGGAA
AGATTTACACAGCTGGCAGATTATTTCTTTGCGGTTTGAGACACAAGCAACGATGGCAAT
ATCACGTAAACTTTGTCGGCTCTTGGTCATTACAACTTTAACTGGAATGGTTTTCTCGTT
GTGCCCGTACGAGTGCATGTGTCGAGACGAACCAACACATTGTCCTGTAGCTGTCAGTCT
TGTAACAGACGGTTGCAATTGCTGCAAAGTTTGTGCCAAACAGACGGGAGAAGAGTGCAA
CGACCAGGAGAAGGTTTGCGATCCGCATCGGGATCTCTTCTGTGATTATTCCGGGAGCAG
GAGCGGAGATTGGGGAGTCTGTAGAGCTGCTCGTCGAGAACAACGCAGCAGGACAAGAGG
CCATTCTTCTTGTGATGTACACACTTCTGCCTGGAGCCCGTGCTCGAAATCGTGTGGCCT
TGGCGTTTCCGTACGCGTGTCCAACGATAACCCCCGGTGTCAGCTCGGCAGGGACATGAG
ACTGTGCCAACTGAGGCCATGCCAAGGAAACCGCTACGGTCCAAAGAAGGGCCGACACTG
CATGCGTCAAAAACGTGCCCGTAAGCGAGAGACACTGACGTACGCCGGCTGTACAAGTGT
GAGAAAGTCAAGACCACGATACTGCGGTGGATGCCATGGACCTTCAAGGTGTTGCACTCC
AAAATCCACACGCACCATCTCAGTTCAATTTCAATGCACGGACGGCAGTTTATTCTCAAA
AAAGATGATGGTGATCCGTAGTTGCTCCTGTCATTCCAACTGCTCGCCCAACGTTGTTCA
TAGAGAGGTGTTCCAGTATGCATTACACAACGACATGCATCAAGCCACCGCCCGATAAGA
GATGAACGATGGACTAAGCGTTCCTTCATTGCCGTGTCCAGCGCGCGCCCTTCGCACCCT
TTTCAAGTCACTCTCAGCACCCAAAACCCCAAACACATTTTAACTGTTTCAAAACCAAAT
TCGTGTCCTGTTTTCAATATAAAAATCGCTGCTTGTTTCGCTTGCCGGTGGGTGTCACTA
GAGAGTTTTCACTGTGACTTTCAAAACAGGAAACACTTCGCTGCGTTACCACGGACGGTC
CAAGTTATGTACATAGTATTTTCTACACAAAGTTTTCTATTTTTTCGTAAGCCATTTCCA
TCGTACTTTGCTTCCGTAACTGCCTTGCGCTGAACGAACTATTTATTTATTCGCTTACGA
CCGTCGGGTTTTATAACACATTTGGTTTCTACTAATCAATACAACACACCAAAGCAGAAT
GGTGCCAGCGAAAAGTGAAGCGAAAACTGCAAATTTAAAAACAAAAAAATAAACTGTTAT
GACAATTCCGCGTTTCTATTATAACAAAAGTTTCGGAAAAATCACATGTGGAAATTAATA
AGAACATAAAAAAAAAACAATTTTATTTTATTTATGCCGCTTACGAATACTCCTTTGCTT
TTACTGATTTTAATAAACAAAGATTAAAA
| ProSiteProfiles |
IGFBP-like (IPR000867) - T[84-160] 12.966 |
| SMART |
IGFBP-like (IPR000867) - T[89-159] 5.7E-8 |
| Pfam |
IGFBP-like (IPR000867) - T[91-144] 7.2E-9 |
| SUPERFAMILY |
Growth_fac_rcpt_cys_sf (IPR009030) - T[93-161] 2.51E-11 |
| Gene3D |
TSP1_rpt_sf (IPR036383) - T[164-222] 4.4E-5 |
| ProSiteProfiles |
TSP1_rpt (IPR000884) - T[173-218] 8.893 |
| SMART |
TSP1_rpt (IPR000884) - T[176-218] 1.9E-4 |
| ProSiteProfiles |
Cys_knot_C (IPR006207) - T[230-305] 14.489 |
| SMART |
Cys_knot_C (IPR006207) - T[235-305] 1.2E-14 |
| Pfam |
Glyco_hormone_CN (IPR006208) - T[239-306] 7.4E-7 |
| ProSitePatterns |
Cys_knot_C (IPR006207) - T[267-304] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CTGF_HUMAN | 41.176 % | 130 | 5.17E-35 |
| CYR61_HUMAN | 45.395 % | 132 | 9.05E-36 |
| NOV_HUMAN | 42.953 % | 125 | 3.78E-33 |