- Transcript 'KH2012:KH.C9.476.v1....'
Transcript Model
Transcript Id
KH2012:KH.C9.476.v1.A.SL1-1
Possible name(s)
CTGF; CYR61; NOV
Gene model
Location
KhC9 [5,873,856 / 5,880,135]
Amino acid sequence
Length: 314
>KH.C9.476.v1.A.SL1-1
AVAQCTSPRVSLGAGAWTGTKAANHSAHTKHISPNLTFVQTRGYSRCLANAATAGCATAP
QGRNSCSRWRGSGLTLWRKNQEVPAPSVPETGNGVMDGIIYEDDVGETIDELMDEQFPQS
MVYEPAIEPEANWIDNNAIPGDVDAARREQRSRTRGHSSCDVHTSAWSPCSKSCGLGVSV
RVSNDNPRCQLGRDMRLCQLRPCQGNRYGPKKGRHCMRQKRARKRETLTYAGCTSVRKSR
PRYCGGCHGPSRCCTPKSTRTISVQFQCTDGSLFSKKMMVIRSCSCHSNCSPNVVHREVF
QYALHNDMHQATAR
Nucleotide sequence
Length: 2,181
>KH2012:KH.C9.476.v1.A.SL1-1
CGATAATTTGTTTCACATTTACTGATCACAAACTGTATTACTTAAACATTTACCTGTCTC
GTGGTGAGAACCACTAAACCATCGTTGAGAAGCAAAGTCGACCAAGCTATTTCTCGTCTC
TTCACACACAGTGACACGAAGCCGCGAAAAGCAAACAAATTCAAGTGTTTCGAAATCCTG
GTGTAGAAATCTGCATAGAATAAATATTATTACACAACCAAGTTATTACAAGAGGAAAGA
TTTACACAGCTGGCAGATTATTTCTTTGCGGTTTGAGACACAAGCAACGATGGCAATATC
ACGTAAACTTTGTCGGCTCTTGGTCATTACAACTTTAACTGGAATGGTTTTCTCGTTGTG
CCCGTACGAGTGCATGTGTCGAGACGAACCAACACATTGTCCTGTAGCTGTCAGTCTTGT
AACAGACGGTTGCAATTGCTGCAAAGTTTGTGCCAAACAGACGGGAGAAGAGTGCAACGA
CCAGGAGAAGGTTTGCGATCCGCATCGGGATCTCTTCTGTGATTATTCCGGGAGCAGGAG
CGGAGATTGGGGAGTCTGTAGAGCGAGGTCGGGTCGTCCTTGCATGAACAACGGTGTACG
ATTAAGCAGTGGCGCAATGTACGAGCCCTCGTGTAAGTTTAGGTGCTGGTGCATGGACGG
GAACGAAGGCTGCCAACCACTCTGCCCACACGAAACACATATCCCCAAATTTGACATTTG
TCCAAACGCGAGGCTACAGCCGGTGTCTGGCGAATGCTGCGACCGCTGGATGTGCGACAG
CTCCTCAGGGGAGGAATTCATGCTCCCGATGGAGAGGTTCTGGACTGACTTTGTGGAGGA
AAAATCAGGAGGTTCCAGCTCCCAGTGTCCCGGAGACCGGTAATGGAGTGATGGATGGGA
TCATTTATGAGGATGATGTTGGAGAAACGATAGACGAACTGATGGACGAGCAGTTTCCAC
AGAGCATGGTGTATGAACCTGCCATTGAACCAGAAGCGAACTGGATCGATAACAATGCAA
TACCAGGGGACGTGGACGCTGCTCGTCGAGAACAACGCAGCAGGACAAGAGGCCATTCTT
CTTGTGATGTACACACTTCTGCCTGGAGCCCGTGCTCGAAATCGTGTGGCCTTGGCGTTT
CCGTACGCGTGTCCAACGATAACCCCCGGTGTCAGCTCGGCAGGGACATGAGACTGTGCC
AACTGAGGCCATGCCAAGGAAACCGCTACGGTCCAAAGAAGGGCCGACACTGCATGCGTC
AAAAACGTGCCCGTAAGCGAGAGACACTGACGTACGCCGGCTGTACAAGTGTGAGAAAGT
CAAGACCACGATACTGCGGTGGATGCCATGGACCTTCAAGGTGTTGCACTCCAAAATCCA
CACGCACCATCTCAGTTCAATTTCAATGCACGGACGGCAGTTTATTCTCAAAAAAGATGA
TGGTGATCCGTAGTTGCTCCTGTCATTCCAACTGCTCGCCCAACGTTGTTCATAGAGAGG
TGTTCCAGTATGCATTACACAACGACATGCATCAAGCCACCGCCCGATAAGAGATGAACG
ATGGACTAAGCGTTCCTTCATTGCCGTGTCCAGCGCGCGCCCTTCGCACCCTTTTCAAGT
CACTCTCAGCACCCAAAACCCCAAACACATTTTAACTGTTTCAAAACCAAATTCGTGTCC
TGTTTTCAATATAAAAATCGCTGCTTGTTTCGCTTGCCGGTGGGTGTCACTAGAGAGTTT
TCACTGTGACTTTCAAAACAGGAAACACTTCGCTGCGTTACCACGGACGGTCCAAGTTAT
GTACATAGTATTTTCTACACAAAGTTTTCTATTTTTTCGTAAGCCATTTCCATCGTACTT
TGCTTCCGTAACTGCCTTGCGCTGAACGAACTATTTATTTATTCGCTTACGACCGTCGGG
TTTTATAACACATTTGGTTTCTACTAATCAATACAACACACCAAAGCAGAATGGTGCCAG
CGAAAAGTGAAGCGAAAACTGCAAATTTAAAAACAAAAAAATAAACTGTTATGACAATTC
CGCGTTTCTATTATAACAAAAGTTTCGGAAAAATCACATGTGGAAATTAATAAGAACATA
AAAAAAAAACAATTTTATTTTATTTATGCCGCTTACGAATACTCCTTTGCTTTTACTGAT
TTTAATAAACAAAGATTAAAA
| Gene3D |
TSP1_rpt_sf (IPR036383) - T[149-208] 4.1E-5 |
| ProSiteProfiles |
TSP1_rpt (IPR000884) - T[159-204] 8.893 |
| SMART |
TSP1_rpt (IPR000884) - T[162-204] 1.9E-4 |
| ProSiteProfiles |
Cys_knot_C (IPR006207) - T[216-291] 14.489 |
| SMART |
Cys_knot_C (IPR006207) - T[221-291] 1.2E-14 |
| Pfam |
Glyco_hormone_CN (IPR006208) - T[225-292] 7.3E-7 |
| ProSitePatterns |
Cys_knot_C (IPR006207) - T[253-290] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CTGF_HUMAN | 40.764 % | 132 | 8.0E-36 |
| CYR61_HUMAN | 45.395 % | 134 | 2.3E-36 |
| NOV_HUMAN | 33.871 % | 127 | 3.56E-34 |