- Transcript 'KH2012:KH.C9.474.v2....'
Transcript Model
Transcript Id
KH2012:KH.C9.474.v2.A.ND1-1
Possible name(s)
RREB1; ZNF366; ZNF70
Gene model
Location
KhC9 [3,491,305 / 3,505,716]
Amino acid sequence
Length: 986
>KH.C9.474.v2.A.ND1-1
AQDVSVKVEAGKDSTMFRTSPMVAYLNVPSWLQTTMQDDWKYVYSRLDSTGLCGIGVHTT
TNNRKMYWCRLCNYASFEKSTIMRHQRTHTGLRPYSCTFCNLAFTTKANCERHVRKRHHH
NIQPNTDVKELVYCDYELLRKARTGSLKEDQMSKIISPNTGRFFSSRSNGARHVMSKHGV
VNRKGANEVIMCMKLNKTSAVKLNQQETNDEVVERKALNVQTNPSQSMGVTPKNPRFDKF
EKPDKLKTQLHVNKKLIPLAKIQSFNNTVSHLYDKFDKQYKNMCEDLNLPDTEDINGSKS
FIVRINNAIQALTKVFENCQASGKYQPTIYSNKPSPKIVSNHDQMMNGSNSFTQDDIAKD
PDCDYAQLFADGKLNCVDDVGDNVLPAIQDTYSYSANFSKEFPAESSVKPVEQNMFNSSW
ETNDFTSVEDLVEFIQHPKVKPIGESLDNDEIMEIQGEKSLNFSDKQKSPQSSISSLKSG
DGWTSMSDNAVQRSHRYLKEVLNEENSMTNDSVYEEALPTMVQTSNRLFRKGNRISKVEN
ESKAMLVTNRTRKCPKCNKVFPWASSLRRHIMTHTGLKPFMCGQCSMQFTTRSNLLRHVY
RRHGLAPTEKNNDYVITLSMSQQKKLAEECSNSNVTSKDLEHKVRPIVSKEDVVLPEKNK
IAVDQVKTPEVKNEGVVYNKRYACGLCGVPFANRSNLVRHLQRLHETTKDHPNFKEMLLK
LDTSRHSESELDSSISDIGGRKFDRKLGIDQNILKKKNRYLPNSPNTTDSKEFKCGICFI
GFTKRNNAARHIQQQHSISKNGTNFCKLIIHSKPQTASSYEEDSDAKLQTSKSTAPDLTK
DIRIEVKQVDEPKVVVKTESMEEEMKEVENETQKETLEKNNCSTEDDKTKPESPIEEKTS
DVSKWSGRRRLTTRKHAIKKEVQEITSNATKKNCENELPKWKGRKRSASRKRLEGEASGE
FTILMQKSTESHTKRKDSNSKLRKTE
Nucleotide sequence
Length: 3,267
>KH2012:KH.C9.474.v2.A.ND1-1
TTGCTCAGGATGTATCTGTGAAAGTTGAAGCAGGAAAAGATTCCACAATGTTCCGCACAT
CTCCTATGGTAGCTTATCTTAATGTACCAAGCTGGTTACAAACTACCATGCAGGATGATT
GGAAATACGTTTATTCAAGATTAGATTCCACTGGCTTGTGTGGCATTGGTGTTCACACAA
CAACCAACAACAGGAAAATGTATTGGTGTCGTCTTTGTAATTATGCATCTTTTGAAAAAA
GCACAATTATGAGACATCAGCGTACACACACTGGCTTGCGACCTTACTCGTGCACTTTCT
GCAACCTCGCTTTCACAACCAAAGCGAATTGTGAACGACACGTACGCAAACGACATCATC
ATAATATTCAACCCAACACTGACGTTAAAGAATTGGTGTATTGTGATTATGAGTTGCTGA
GAAAAGCGAGAACTGGTTCGTTGAAGGAAGATCAAATGTCGAAAATAATTTCTCCGAACA
CTGGAAGATTCTTCAGCTCCCGAAGCAATGGAGCAAGACACGTCATGAGCAAACATGGAG
TGGTTAATAGAAAAGGTGCAAACGAAGTTATAATGTGCATGAAGCTGAACAAAACTTCGG
CAGTCAAATTGAACCAACAAGAAACGAATGATGAAGTTGTGGAAAGAAAAGCTTTGAACG
TACAAACCAACCCCTCACAATCGATGGGTGTAACTCCAAAAAATCCGAGATTTGACAAGT
TCGAGAAACCTGACAAGTTAAAGACGCAATTGCACGTCAACAAGAAATTGATCCCTTTAG
CCAAGATACAATCTTTCAATAACACAGTTTCGCATCTGTACGACAAGTTTGACAAGCAGT
ACAAGAATATGTGTGAAGATTTAAATCTGCCAGATACAGAAGATATAAATGGGAGCAAAA
GTTTTATCGTTCGTATTAACAACGCCATACAAGCCTTGACGAAGGTGTTTGAAAATTGTC
AGGCATCTGGAAAGTACCAGCCAACCATTTATTCGAATAAACCATCTCCGAAAATAGTTT
CAAACCATGATCAGATGATGAATGGTTCCAATTCCTTCACACAGGATGATATAGCTAAAG
ATCCAGACTGTGACTATGCCCAATTATTTGCTGATGGCAAACTTAATTGTGTGGATGATG
TGGGAGATAATGTATTACCAGCTATACAAGACACTTATTCATATTCAGCAAACTTTAGTA
AAGAGTTCCCTGCAGAATCCTCAGTTAAACCTGTTGAACAAAACATGTTCAATTCCTCGT
GGGAAACGAATGATTTTACGAGTGTTGAAGATTTGGTGGAATTTATTCAACATCCAAAAG
TTAAACCTATTGGAGAAAGTCTCGATAATGATGAAATAATGGAAATACAGGGAGAAAAAA
GTTTAAATTTTAGCGACAAACAGAAATCTCCACAGAGTTCTATTTCTTCATTAAAATCTG
GGGATGGTTGGACTTCTATGTCCGATAATGCTGTACAACGAAGTCACAGATATTTAAAGG
AAGTTTTAAATGAAGAAAACTCGATGACAAATGATTCAGTATATGAAGAAGCATTACCTA
CAATGGTACAAACCTCCAATAGGTTGTTTCGTAAAGGCAACCGAATTTCTAAGGTCGAAA
ATGAATCCAAAGCTATGTTGGTAACAAATAGAACACGAAAATGTCCGAAATGTAACAAAG
TGTTTCCATGGGCGTCGTCGTTGCGTCGACATATTATGACACATACTGGCCTGAAGCCAT
TTATGTGCGGACAATGCTCAATGCAATTTACCACTCGCTCAAATTTGCTGCGTCATGTTT
ACCGCCGTCATGGTTTGGCACCTACGGAAAAAAATAATGATTACGTCATCACTTTGTCCA
TGAGTCAGCAAAAAAAGCTTGCGGAAGAATGCAGTAATTCAAATGTGACCAGCAAAGATT
TGGAACACAAAGTTAGACCCATAGTTAGCAAAGAAGATGTGGTTTTACCTGAAAAGAATA
AAATTGCGGTTGATCAAGTTAAAACACCCGAAGTAAAAAACGAGGGGGTGGTTTATAATA
AGCGTTATGCTTGTGGTCTATGCGGCGTTCCGTTCGCAAATCGATCAAATCTTGTCCGAC
ATTTGCAACGTTTACACGAGACAACCAAAGATCATCCAAACTTTAAGGAAATGTTGTTAA
AACTAGACACTTCTCGTCATTCGGAATCGGAACTGGATTCATCAATAAGTGACATAGGCG
GAAGAAAGTTCGATCGGAAACTTGGAATTGATCAAAATATCTTGAAAAAGAAAAACAGAT
ACCTTCCAAATTCACCAAATACCACTGATTCCAAGGAATTTAAATGCGGGATTTGCTTTA
TTGGCTTCACAAAGAGAAACAACGCCGCTCGACACATACAACAACAACATAGTATTTCGA
AAAACGGAACAAACTTTTGCAAGCTCATTATACATAGTAAACCTCAAACAGCCTCGTCAT
ATGAGGAAGATTCTGACGCCAAACTGCAAACCAGTAAATCTACTGCTCCAGATTTAACGA
AAGATATTCGTATTGAAGTGAAACAAGTGGACGAACCAAAAGTTGTCGTGAAAACTGAAA
GCATGGAAGAAGAGATGAAAGAAGTGGAAAATGAAACACAAAAGGAAACTTTAGAAAAAA
ATAACTGTTCGACGGAAGATGACAAAACGAAGCCGGAGTCTCCAATTGAGGAAAAAACTT
CTGATGTTTCCAAGTGGTCTGGTAGAAGAAGATTAACAACAAGAAAACATGCGATAAAAA
AAGAAGTCCAAGAAATTACTTCAAATGCTACGAAAAAAAATTGCGAAAATGAACTTCCTA
AGTGGAAAGGAAGAAAACGATCCGCTTCAAGGAAACGGTTGGAAGGTGAAGCTTCAGGTG
AATTTACAATTTTGATGCAAAAGTCGACAGAATCGCATACAAAACGAAAGGATTCAAACT
CAAAATTGCGGAAAACTGAGTAACTTCACATTTTTCATCTGGAATTCTGATTTTTGTTTT
CAATACTGTTGCAACTAGCTTAGTAAAGTGAACTTTTCAGCAAATATTTCCTCTTTTTTA
GTTAAATCATTTCTTTGGTTTAATTATGTCGTTTACATCGTACTTTCCTGTGCACTTTCA
TTATTAATTGGCCGCTCCTGATCTGGTGTACCGTATTTGTATTCCGCTATCGCTGAAAAA
CATGAATGGATTTTTGAAACTTATATTTAAACCGTAATTTTGAAAACAAAGGACGTAATA
AACCGTACTTTATTAAAACGGAAAAAA
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[65-115] 3.99E-11 - T[552-599] 1.71E-14 - T[680-705] 4.09E-7 - T[768-792] 4.09E-7 |
| SMART |
Znf_C2H2_type (IPR013087) - T[67-89] 9.5 - T[95-118] 0.0057 - T[552-574] 2.5E-4 - T[580-603] 0.0057 - T[682-705] 0.011 - T[773-796] 1.6 |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[67-94] 12.549 - T[95-124] 10.471 - T[552-579] 13.734 - T[580-607] 9.951 - T[682-710] 11.801 - T[773-801] 8.974 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[97-119] . - T[554-574] . - T[582-603] . - T[684-705] . - T[775-796] . |
| Protein Name | Identity | Bit Score | e-value |
|---|