- Transcript 'Phmamm.CG.MTP2014.S5...' >
- Transcript 'KH2012:KH.C9.38.v1.A...'
Transcript Model
Transcript Id
KH2012:KH.C9.38.v1.A.SL3-3
Possible name(s)
FUBP1; FUBP3; KHSRP
Gene model
Location
KhC9 [5,592,648 / 5,602,037]
Amino acid sequence
Length: 655
>KH.C9.38.v1.A.SL3-3
EPGPKKLATPQTSAANSEQIEFDNLGMQQNPDIMSDTIRLPDDLVGLIIGRGGENIMRMQ
RETGCRIQITQSIPGTKERPCTLSGTQEQIEVCRNMLNEIISRSQAGTLGSNFNLSQGGL
GGMGDGGMEKSIEIAVPPDKCGLIIGKGGETIKMLQQSLGVKMLLIQDSTDNIGQSKPLR
ITGPQLNVDNAVSAVHQMMANRDQQIAQQKMERDGGGGGGQGGMDPNMFGDDVNKTIIPV
PKAAVGVVIGKGGDMINQIQNVTGTRVQFKPEDPTLPERMCSVMGPKEGVDAAIRRIHEI
IQNVQERDAGNRGGSGGGGGGSGGGHPGGMGGFGQWEGPNMGRGGRGMGMASEEHLVPAN
KTGLVIGKGGDTIKQINMQSGAHAEIQRNPPPGSDLNYKTFIIKGTPEQIKMARQLIQEK
VDAGPGGSSNGQMHGGHMGGQPPMSNFGPPPHQQGGYGGLPPAAGYGHPSHNPLQGPPQA
PQAPQSYQQPWGNQFQQWNSPTVSAPQQNGADPTKPVADSSNAAAWQTYLQMYGAQAQAY
QQPAAAAAVSAAPASQPDYSKQWDEYLKQNAAAVAEQRQQLTLAAPAAAAAIQQQQVAAP
AAAAPAASAAVQPATTQAADYSAAWAEYYRQYYAMHGQAGYAAAAAAAGQAPAPT
Nucleotide sequence
Length: 2,179
>KH2012:KH.C9.38.v1.A.SL3-3
AAGAACCTGGCCCAAAGAAACTAGCTACTCCTCAGACGTCTGCTGCAAACAGTGAACAAA
TAGAATTCGATAACCTTGGAATGCAACAAAATCCAGATATAATGTCAGATACGATCAGAT
TGCCAGATGATCTTGTGGGATTAATTATTGGTAGGGGAGGGGAAAACATAATGCGAATGC
AACGTGAAACTGGATGTAGGATTCAAATCACGCAAAGTATTCCGGGCACCAAAGAAAGAC
CATGCACACTGTCGGGCACTCAAGAACAAATAGAAGTGTGCAGAAATATGTTGAATGAAA
TAATCTCCCGTTCACAAGCGGGCACACTGGGCAGCAACTTTAATCTTTCACAAGGTGGCT
TGGGGGGTATGGGGGACGGAGGAATGGAGAAATCTATCGAGATCGCTGTCCCACCCGACA
AGTGTGGTCTTATAATTGGAAAAGGTGGAGAAACAATTAAAATGTTGCAGCAAAGTTTGG
GGGTTAAGATGTTGCTGATTCAGGATTCTACTGATAACATCGGTCAGAGCAAACCACTGA
GGATAACTGGTCCACAACTTAATGTTGATAATGCAGTGAGTGCAGTTCACCAGATGATGG
CAAACCGTGACCAACAGATTGCTCAGCAGAAGATGGAGAGAGATGGAGGCGGCGGTGGTG
GACAAGGGGGCATGGATCCCAATATGTTTGGAGATGATGTGAACAAAACCATCATCCCAG
TTCCCAAAGCTGCCGTTGGAGTAGTGATTGGGAAAGGCGGGGACATGATCAACCAAATCC
AAAACGTCACTGGAACCAGAGTTCAGTTCAAACCAGAGGATCCTACTTTACCTGAACGTA
TGTGCAGCGTGATGGGACCAAAGGAAGGAGTAGATGCTGCTATTAGAAGGATCCATGAGA
TTATACAGAACGTACAAGAACGTGATGCAGGTAACAGAGGAGGCAGTGGTGGTGGAGGAG
GTGGCAGTGGGGGAGGTCATCCTGGTGGAATGGGAGGATTTGGCCAGTGGGAAGGACCAA
ACATGGGTCGGGGTGGTAGAGGCATGGGAATGGCATCTGAGGAACACTTGGTGCCTGCTA
ATAAAACTGGACTGGTAATTGGAAAAGGTGGAGACACCATTAAACAAATCAACATGCAGT
CTGGTGCACATGCTGAGATACAGAGAAATCCTCCACCTGGTTCAGATCTCAATTACAAAA
CTTTCATCATCAAAGGCACTCCTGAACAAATTAAAATGGCGCGCCAGTTGATCCAGGAGA
AAGTTGACGCTGGTCCAGGTGGTTCGAGCAATGGACAGATGCACGGTGGACACATGGGAG
GCCAACCACCTATGAGTAACTTTGGTCCACCACCACACCAGCAGGGAGGGTATGGTGGTC
TCCCACCAGCAGCAGGATATGGACATCCAAGCCATAACCCATTGCAGGGGCCACCTCAGG
CTCCCCAAGCACCACAGTCATACCAGCAACCATGGGGTAATCAATTTCAGCAATGGAATT
CACCAACTGTGTCCGCTCCACAGCAAAACGGTGCTGATCCAACGAAACCTGTGGCTGATT
CTAGCAATGCTGCAGCTTGGCAGACGTACCTTCAAATGTATGGAGCACAAGCACAAGCAT
ACCAACAACCTGCTGCTGCTGCTGCAGTTTCCGCTGCACCTGCTTCACAACCAGATTATT
CCAAACAATGGGATGAATACTTGAAACAGAATGCTGCGGCAGTTGCAGAACAACGTCAAC
AACTTACTTTGGCCGCTCCAGCCGCTGCTGCTGCCATTCAACAACAACAGGTAGCTGCTC
CAGCTGCTGCTGCACCGGCTGCCTCTGCTGCTGTTCAACCAGCTACCACTCAGGCGGCTG
ACTATTCTGCAGCATGGGCCGAGTATTACAGACAATACTACGCCATGCACGGACAAGCAG
GTTATGCGGCTGCTGCTGCCGCTGCTGGACAAGCCCCAGCCCCAACGTAAACATTTCCAG
TATCACTGATCACCATTGTAAATATCCAAGTTTCAGGACTTCCATGGTTGAGGAAATATC
CCTCCGCATCAAAATTGTGGAGAAAAACCATCTGGGACACAGATCCGTAAACTGGCCAAC
TGTTTTTTGCTCCGTTGCTTGTGTTTGTATGTTTTATGTAGATGTAATAAAATCACGCAA
TCGTAGAGTCGATGTAACA
| Gene3D |
KH_dom_type_1_sf (IPR036612) - T[23-107] 1.6E-23 - T[130-207] 4.5E-20 - T[227-331] 2.3E-25 - T[353-421] 2.4E-26 |
| SUPERFAMILY |
KH_dom_type_1_sf (IPR036612) - T[26-103] 1.37E-18 - T[128-218] 2.19E-15 - T[227-307] 3.07E-18 - T[347-422] 6.87E-16 |
| SMART |
KH_dom (IPR004087) - T[32-102] 5.1E-16 - T[128-200] 1.9E-14 - T[232-302] 1.6E-15 - T[349-422] 4.4E-12 |
| Pfam |
KH_dom_type_1 (IPR004088) - T[37-99] 3.3E-17 - T[132-196] 8.6E-13 - T[236-299] 4.8E-15 - T[355-419] 2.4E-14 |
| Pfam |
FUBP_C (IPR015096) - T[614-631] 1.5E-4 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FUBP1_HUMAN | 41.33 % | 275 | 2.53E-83 |
| FUBP2_HUMAN | 35.91 % | 275 | 6.95E-83 |
| FUBP3_HUMAN | 38.757 % | 302 | 2.32E-94 |