- Transcript 'Phmamm.CG.MTP2014.S1...' >
- Transcript 'KH2012:KH.C9.38.v11....'
Transcript Model
Transcript Id
KH2012:KH.C9.38.v11.A.ND5-1
Possible name(s)
FUBP1; FUBP3; KHSRP
Gene model
Location
KhC9 [5,590,641 / 5,594,606]
Amino acid sequence
Length: 202
>KH.C9.38.v11.A.ND5-1
PLMHLETHKLTIFLLESTLQTHRTWPKETSYSSDVCCKQDIMSDTIRLPDDLVGLIIGRG
GENIMRMQRETGCRIQITQSIPGTKERPCTLSGTQEQIEVCRNMLNEIISRSQAGTLGSN
FNLSQGGLGGMGDGGMEKSIEIAVPPDKCGLIIGKGGETIKMLQQSLGVKMLLIQDSTDN
IGQSKPLRITGPQLNVDVCVCM
Nucleotide sequence
Length: 1,249
>KH2012:KH.C9.38.v11.A.ND5-1
GAACGTTGCTTTAGATTTGTGCAGCCAATTTGTGTAAGAAGAAACAAGTTTCCACAGGCT
GTTTTCTTGTAGATGGCCGCCGTGACCGCTAATGCATCTGGAGACGCACAAATTGACAAT
ATTTCTGCTGGAGTCGACACTACAAACGCACAGAACCTGGCCCAAAGAAACTAGCTACTC
CTCAGACGTCTGCTGCAAACAAGATATAATGTCAGATACGATCAGATTGCCAGATGATCT
TGTGGGATTAATTATTGGTAGGGGAGGGGAAAACATAATGCGAATGCAACGTGAAACTGG
ATGTAGGATTCAAATCACGCAAAGTATTCCGGGCACCAAAGAAAGACCATGCACACTGTC
GGGCACTCAAGAACAAATAGAAGTGTGCAGAAATATGTTGAATGAAATAATCTCCCGTTC
ACAAGCGGGCACACTGGGCAGCAACTTTAATCTTTCACAAGGTGGCTTGGGGGGTATGGG
GGACGGAGGAATGGAGAAATCTATCGAGATCGCTGTCCCACCCGACAAGTGTGGTCTTAT
AATTGGAAAAGGTGGAGAAACAATTAAAATGTTGCAGCAAAGTTTGGGGGTTAAGATGTT
GCTGATTCAGGATTCTACTGATAACATCGGTCAGAGCAAACCACTGAGGATAACTGGTCC
ACAACTTAATGTTGATGTATGTGTATGCATGTGAATAGCTTTGACTTAACCGTCTATTAC
TAGGTTTTCTTACTTTTAGTAGGAGATATAAGTATTATACTTTTAGTTTAATTGCTAGAT
CCCACCCCCTCCCCTTGCATGTTGCATGTATTTGTTGAAATAATGTCTAAGTGATGAAAC
TGTAACTTGCCAGTTCTGCTTCTGAAATTTATTGATGCTACAAGTTACATAATACTGACA
GACATTTTACCAACAATAGTGCTTAATGTCCATGTAACCTAATGTTCTATTGCACATGGA
TAATAATGCAAACATATTACTTTACATTTGGCTTAACCAATATGATGGGTTCAAGTTCCA
TGAAATGCTTAAAATCATCTGTCTAAATTTAATGACTTCACGGACAAACTTTCTATTGGC
CAATTCCAGTTTCATTAAAAGTAATTTCCGTAACAGAATGCAGTGAGTGCAGTTCACCAG
ATGATGGCAAACCGTGACCAACAGATTGCTCAGCAGAAGATGGAGAGAGATGGAGGCGGC
GGTGGTGGACAAGGGGGCATGGATGTAAATAAAACCGTACAGGCTTAAT
| Gene3D |
KH_dom_type_1_sf (IPR036612) - T[32-115] 2.8E-24 - T[127-202] 1.2E-18 |
| SUPERFAMILY |
KH_dom_type_1_sf (IPR036612) - T[39-111] 4.38E-19 - T[133-201] 7.41E-13 |
| SMART |
KH_dom (IPR004087) - T[40-110] 5.1E-16 - T[136-200] 3.6E-6 |
| Pfam |
KH_dom_type_1 (IPR004088) - T[45-107] 4.9E-18 - T[140-200] 2.3E-12 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FUBP1_HUMAN | 45.098 % | 130 | 2.75E-35 |
| FUBP2_HUMAN | 45.333 % | 132 | 5.47E-36 |
| FUBP3_HUMAN | 44.586 % | 127 | 1.85E-34 |