Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C9.344.v1.A.nonSL6-1

Possible name(s)

CDK3; CDK5; TEN1-CDK3

Gene model

KH2012:KH.C9.344

Location

KhC9 [6,535,423 / 6,537,062]

Sequences

Amino acid sequence

Length: 250

>KH.C9.344.v1.A.nonSL6-1
EGLNKMHKYEKIEKIGEGTYGTVFKAKNRESGEVVALKRVQLDDDDEGVPSSALREICIL
KELKHKNVVRLHDVLHSERKMTLVFEYCEQDLKKYFDSCGGEIDRPTVQSFMYQLLKAEV
VTLWYRPPDVLFGAKLYSTTIDTWSAGCIFAEISNAGVPLFPGNDVEDQLKRIFKVLGTP
TEQSWPGVSKLPDFKIFPLYPSNAHWAAITPRLSSSGHDLLKCLIVANPSERLTASNALK
HRYFDDIHTS

Nucleotide sequence

Length: 1,498

>KH2012:KH.C9.344.v1.A.nonSL6-1
TGCAACAATTGATTTTAAGTTTGAAGAAAAGCTAAGAAGGTTTGAATAAAATGCACAAGT
ATGAAAAGATCGAAAAGATTGGCGAAGGAACCTACGGAACGGTGTTTAAAGCGAAGAATC
GTGAAAGCGGGGAAGTTGTTGCTTTGAAACGAGTCCAACTTGATGACGACGACGAGGGGG
TTCCAAGTTCAGCGCTCAGGGAGATCTGTATTCTGAAGGAACTTAAACATAAGAATGTTG
TTCGACTGCATGATGTGTTGCATAGTGAACGTAAGATGACGTTGGTGTTCGAATATTGTG
AGCAGGATTTAAAAAAGTATTTTGATTCTTGTGGTGGCGAGATTGACAGGCCAACCGTGC
AGTCGTTCATGTACCAACTGCTCAAAGCCGAGGTTGTTACGCTGTGGTACCGACCCCCTG
ATGTTTTGTTTGGTGCTAAGCTTTACTCCACCACCATCGACACATGGAGTGCTGGCTGTA
TTTTCGCTGAGATATCTAACGCAGGCGTTCCCTTGTTCCCCGGCAACGATGTCGAAGATC
AATTGAAACGAATCTTCAAAGTCCTCGGGACTCCAACCGAGCAATCTTGGCCAGGGGTTT
CAAAACTCCCTGACTTTAAGATCTTTCCCCTCTACCCCAGCAACGCGCACTGGGCGGCCA
TAACACCACGATTGTCATCCAGCGGACATGATCTCTTGAAATGTTTGATTGTAGCGAATC
CTAGCGAACGACTAACAGCATCCAATGCATTGAAACATCGATATTTTGATGACATACACA
CCAGCTGACGTTAATCACCATTAACACATGATACACACAATCACATTTATTACAAAAATA
CCTAATTTATCATCATTGGGAAACAAGATTTTTACAACTGAAATCAATTTTCTGAGGCTA
ATATCTGAGGGTTTTTATGGCAGATTTAATTTTTAATTTTGCAGATATTTTTCTACAACC
AATGTTTTGCATTTTCTCCAGTCTTTGAGTTTTGTTAATGTCTGCAACTTGTTTGCGTTC
TTCAAAAACATTTATTGATATTTACCTTTGAAGAAATCCTCCCAAGTTTATTTTTGTTAA
GAAGCTTTTCTTGTTTTACTGTTATGTTTGTTTTAGATTCTGCTGTGTATTCAAGAATTA
GGAGAATGAATTTCATTATCGTAATGTATTTCATGCTTGTGCAATATAACATAACATATA
GCTATTTGACATTCCCATATTTTCATTTAAACAGAAATATTTTGCTTTTATGTTCCCCTA
CCAAGCTAAGCTAAATGTTTAAAGTATTTAACTTGGTCTTGCTTCACTTAACTCTAATGT
ACCTTGTGTAACTATCTGCATAGGCACCAAACCTGGGGTGGCAGGGTGGGCAGACATGCC
CTTTAATTTTATACCCCTGTAATCAGTAAACATTACAACCAATAAGTTAGATTTGTTTAA
TAAGCTTGTATGTCTAACTATCCCTGCCTCCCCTGTGTTTGTATAGTTTGACGCCTAT

InterProScan

SUPERFAMILY	Kinase-like_dom_sf (IPR011009) - T[4-248] 3.37E-66
Pfam	Prot_kinase_dom (IPR000719) - T[9-118] 1.9E-25
ProSiteProfiles	Prot_kinase_dom (IPR000719) - T[9-244] 17.46
ProSitePatterns	Protein_kinase_ATP_BS (IPR017441) - T[15-38] .

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
CDK5_HUMAN	60.208 %	364	2.26E-128
CDK3_HUMAN	46.528 %	253	1.82E-84
CDK2_HUMAN	42.466 %	236	6.6E-78