Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C9.342.v1.A.ND1-1

Possible name(s)

KH.C9.342

Gene model

KH2012:KH.C9.342

Location

KhC9 [3,946,967 / 3,952,184]

Sequences

Amino acid sequence

Length: 521

>KH.C9.342.v1.A.ND1-1
TVVLILFRKFIFCLYMLVVMNGFSYLLLLFGVVSTAGLECRNCIANDNYRGEAGLNDDCY
DNPLNVQTQTCTGHCYTRFSVQDGIPTSVSRRCSPASLPTITHLCVVSFGSSLDIATTAC
SYYCNDGDNCNDLTTRNLITCPNNCGYISKGYCDYFTGNCVCAEGYQGTNCSTEIVVPPI
YRSCVQCNGATDESCETNTQGSPCPETTLTQPYCSSSKTSTIDKSGLVIREVVTRGCTAR
FTYEDECFFSAPNDNVFSSEYTEHTCNSMCDTDNCNTNTPNGVIDGDESKPLYCFQCTTS
SESDGSQQSSPCQAQLTRCPSDSTHCVSTVVYYISEITDRNYQVNPSYQLKSINRGCASA
PRIKGCESYTIGSLNAFNVTCQESCQTDGCNTGWPSRPRCSICTSAVTGQSNNAMSSDYD
SCLINPPLGTSCPFPYQSYCVASVTKSGSGNSGFMARGCSSYNIGNACKYIGDETFSYQV
CNRSCTTNNCNMGDISSGSAALTHHMWLPAIPLLCLLILRQ

Nucleotide sequence

Length: 1,769

>KH2012:KH.C9.342.v1.A.ND1-1
GCTCGATGAACAGTAAAGGTATAAGGTTAAACAGTAGTTTTAATTTTGTTTAGAAAATTT
ATCTTTTGCCTATATATGCTAGTTGTTATGAACGGTTTCAGTTACTTACTGCTTCTATTT
GGAGTTGTTTCCACCGCAGGTCTTGAGTGCAGAAACTGCATTGCTAACGACAATTACCGA
GGGGAAGCAGGTTTAAATGACGATTGTTATGATAACCCGCTTAATGTACAAACGCAAACG
TGCACTGGTCACTGCTACACAAGATTTTCAGTTCAAGATGGTATTCCGACTTCTGTAAGT
CGAAGGTGTTCTCCAGCCAGCTTACCCACGATTACCCATCTTTGCGTGGTGTCATTTGGA
TCCAGCCTTGACATTGCTACCACTGCTTGCTCGTATTATTGCAACGACGGCGACAACTGC
AACGATCTTACAACCAGAAACTTGATAACTTGCCCCAACAACTGCGGTTACATCAGTAAA
GGTTATTGCGATTATTTCACTGGAAATTGCGTTTGTGCTGAAGGTTACCAAGGAACCAAC
TGTTCCACAGAGATAGTTGTCCCACCAATATACCGAAGTTGTGTGCAATGTAACGGTGCA
ACTGATGAATCGTGTGAAACAAACACACAAGGATCGCCTTGTCCAGAAACGACTTTGACC
CAGCCTTACTGTTCGTCGTCGAAAACCAGCACAATTGACAAATCTGGCCTCGTTATCCGA
GAAGTGGTCACACGCGGTTGTACAGCGCGGTTTACTTACGAAGACGAATGTTTCTTCTCC
GCACCGAACGATAATGTGTTCTCATCCGAATACACGGAGCATACCTGCAACTCAATGTGC
GACACTGATAACTGCAACACGAATACCCCAAACGGAGTGATTGACGGCGACGAGTCGAAG
CCATTATATTGCTTCCAATGCACAACAAGCAGTGAAAGCGATGGTAGTCAACAAAGTTCG
CCCTGTCAGGCGCAACTAACTCGATGTCCATCAGACAGCACACACTGCGTATCGACTGTT
GTGTATTATATCTCGGAAATTACGGATCGTAACTATCAAGTAAACCCGAGTTACCAATTG
AAGAGCATTAACCGTGGTTGTGCGTCGGCTCCAAGGATCAAAGGTTGCGAATCTTATACG
ATCGGTTCGTTAAATGCCTTTAACGTGACTTGTCAAGAAAGCTGTCAAACCGACGGGTGT
AACACTGGGTGGCCTTCCAGGCCACGTTGTTCTATCTGCACAAGTGCGGTTACTGGTCAA
AGCAACAATGCGATGAGTTCGGATTACGATAGCTGTCTAATCAATCCCCCTCTTGGTACG
AGTTGTCCATTTCCCTACCAAAGCTACTGCGTTGCTTCTGTTACGAAATCAGGTTCAGGA
AATAGCGGCTTCATGGCTAGAGGATGCAGTAGTTATAATATAGGCAACGCTTGCAAATAT
ATTGGCGATGAAACTTTTTCTTACCAAGTTTGCAATCGAAGCTGTACAACCAACAACTGC
AATATGGGAGATATTAGTTCAGGTTCTGCTGCTCTTACGCACCATATGTGGTTACCTGCA
ATTCCCCTTCTTTGCTTGTTGATTCTCAGACAATAAAATTGATCGTGTTTACTGTTGAGC
ATGTTATCGCGCATATATAATTCAATCGTTTCATTTTGTATTAAAGAGTTTTTAGATTTT
ACGTAGTAAAATCACTTTAAGATATATTCAAGAGTTATTATTGTCATTTCGGTTGCAAAA
GTTGCTGCAAAATAAAACTTGTATGCAAA

InterProScan

ProSiteProfiles	EGF-like_dom (IPR000742) - T[137-172] 8.871
ProSitePatterns	EGF-like_CS (IPR013032) - T[160-171] . - T[160-171] .

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value