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  1. Transcript 'KH2012:KH.C9.331.v1....'

Transcript Model

Transcript Id

KH2012:KH.C9.331.v1.A.SL1-1

Possible name(s)

ACTA1; ACTR3; ACTR3B

Gene model

KH2012:KH.C9.331

Location

KhC9 [3,282,566 / 3,288,366]

Sequences

Amino acid sequence

Length: 296

>KH.C9.331.v1.A.SL1-1
IYSSGVLNKMAMGTLPACVVDVGTGYTKLGYAGNTEPQFIQPSSICVKESANVGNKVAKG
VDDLDFYIGDDVQDKPTYATKWPVRHGIVEDWDLMEKFMEQIIFKYLRAEPEDHHFLMXV
GKYEADPKKWIKVYEGLNSVTREQFNVDVGHERFLGPEIFFHPEFSNPDFTTPISTVVDD
VIQNCPIDVRRPLYKNVVLSGGSTMFKDFGRRVQRDLKRLVDARLKISESLSGGRIKPKP
MEVQVISHSMQRYAVWFGGSMLASTAEFYKVCHTKADYDERGPSICRYNPVFGTMS

Nucleotide sequence

Length: 1,488

>KH2012:KH.C9.331.v1.A.SL1-1
TGTGTGATATTCGATAGTGGGTTCATAGCAGTTGAATATATAGTAGTGGGGTTTTGAACA
AGATGGCCATGGGTACGTTACCAGCATGTGTGGTGGATGTGGGAACAGGATACACCAAAC
TTGGTTATGCAGGGAATACTGAACCTCAGTTCATTCAACCATCTTCGATATGTGTAAAAG
AATCTGCAAATGTTGGAAACAAAGTTGCGAAGGGAGTCGATGATTTGGATTTTTATATTG
GGGACGATGTACAAGATAAACCTACGTATGCCACTAAGTGGCCAGTAAGGCATGGGATTG
TGGAAGACTGGGACTTGATGGAGAAATTTATGGAACAAATTATTTTTAAGTATCTTCGAG
CAGAGCCAGAGGATCACCATTTCTTGATGNGAGTTGGAAAATATGAGGCAGACCCAAAGA
AATGGATTAAAGTTTACGAAGGGTTAAACTCGGTCACCCGTGAACAGTTTAACGTGGATG
TCGGGCATGAACGATTTTTGGGACCAGAAATTTTCTTTCATCCAGAATTCTCTAACCCGG
ACTTCACTACCCCGATATCCACAGTAGTTGATGATGTAATCCAGAACTGCCCCATTGATG
TCCGTAGACCACTGTACAAGAACGTTGTGTTATCTGGTGGTTCTACAATGTTTAAAGACT
TTGGAAGGCGTGTCCAGCGTGATTTGAAAAGATTGGTGGATGCGAGACTCAAGATATCTG
AAAGTCTCAGTGGAGGAAGAATCAAGCCAAAGCCAATGGAGGTACAAGTGATATCCCACA
GCATGCAGCGTTATGCAGTTTGGTTTGGTGGTTCAATGCTCGCTTCCACGGCCGAGTTCT
ACAAAGTCTGTCACACAAAAGCTGATTACGATGAGCGTGGCCCAAGCATCTGCAGATACA
ATCCAGTGTTTGGCACAATGTCTTAAGACCTAGCTTTGCACTTAATGATGGCAACTTATC
CAATCAACTTCTTGCGACGAGAAATTGTGTTTCAATTATCATATTATTCCTATATATTGT
GTTATAAACAGCTGATCTTTTGCTTTTTAGGCATTGTATGTTCTGTATGCACTGTTTATA
ATATGTGAATAAGATATATCTTGTGCTTGGTTTTTGATTAAAGAAAATTTAGCTAAGGCA
ACATCAATGCCTAATTAATGATGTTCAGCAAAACCCTATTATATTTGGCATGCCATTCCA
TTGTAATATGTATGGTACCTATCAAGCCACGCTAAAAACTTTAAGTAACTCGTCAATATT
CAGGTAAAGAAATGCTTGAAATTCCTAATTAACCAATCATTTATCTTAACCGGATAGGTT
GTGCCTTCGTATAATTGTGCGAAGTATTGCTATCAACATATATCTAACCGGTATCGTTTT
TAAATACAATGGAGTTTCAACTTTACAAATAAGAGTTTTCAACATTTAAAATGTAATCGG
TGCATGATGTGTTTTACTTCTTAGCACGAATACATCATTGTTCGAAAA

InterProScan

SMART
Actin (IPR004000) - T[15-291] 1.6E-44
PANTHER
Actin (IPR004000) - T[15-119] 2.1E-142 - T[121-293] 2.1E-142
PANTHER
Arp3 (IPR015623) - T[15-119] 2.1E-142 - T[121-293] 2.1E-142
Pfam
Actin (IPR004000) - T[16-119] 1.2E-18 - T[146-287] 8.3E-31

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
ARP3_HUMAN 78.286 % 306 7.31E-103
ARP3B_HUMAN 77.273 % 303 1.06E-101
ARP3C_HUMAN 69.333 % 119 8.72E-33