- Transcript 'KH2012:KH.C9.309.v1....'
Transcript Model
Transcript Id
KH2012:KH.C9.309.v1.A.nonSL3-1
Possible name(s)
PRPF40A; PRPF40B; WAC
Gene model
Location
KhC9 [388,813 / 397,530]
Amino acid sequence
Length: 465
>KH.C9.309.v1.A.nonSL3-1
MKTAMYGRSVSQIDGYREQATKPSVHQHNNNRHSVPSKDRDRRKNEMTHSKQKHLQANKV
TANHTSKTNSTKHQKGALRSCGSWSEHVSSSGKIYYYNSKNEVSQWEKPKDWNDSKVVDL
RSHDKSKSSQRASSGGNPLVNRSTSKPGSSDVEYRGSRSNQDRDYRNKSDRDYRDVDYRD
NQAKDVRRVTSVDKDYRPRDHTTTSTGSNGHPLTHGKDSYIPSTGEFYDYSTWGGRTSNT
PLVNGVSSTENTQSSQQPQDGDKATTVTVETSESKPEEESATSAFVRTLSNVLTQASNKS
TDAEGNLKNALQLLLNAASKSQTETTEPENGNHESTTETNTTDPPPNKRPRVSSDDTKKD
TGEPPEVIPTFPHLEELQKVFDPNLTTHAQGWSTEPAEKQCNRLTEDYHKFIADHMTNLN
AQMTTARSKVRASEILSTLQEQRILYLRQQISDLEKNSTTTTPFT
Nucleotide sequence
Length: 1,875
>KH2012:KH.C9.309.v1.A.nonSL3-1
ATAATTGAAGATGTGGTGATGTTTTGGTAATTATACGGTATTTACAGAAGCGTGAATGAA
GACAGCAATGTACGGAAGAAGTGTCTCGCAGATTGACGGGTACCGAGAGCAAGCCACTAA
GCCATCAGTTCACCAGCACAACAACAATCGGCATTCTGTTCCGTCAAAAGACCGAGATCG
AAGAAAAAATGAAATGACGCACTCGAAACAAAAACATCTTCAAGCAAATAAAGTCACTGC
AAACCACACCAGCAAGACCAACAGCACCAAACATCAAAAGGGTGCCTTAAGGAGTTGTGG
AAGCTGGTCGGAGCATGTGAGTTCTTCCGGGAAGATATATTACTACAACAGTAAGAATGA
AGTATCACAATGGGAGAAACCAAAGGATTGGAATGACAGCAAAGTTGTTGATTTACGAAG
TCATGACAAATCGAAATCATCACAAAGAGCATCAAGTGGGGGGAATCCACTTGTAAATCG
TTCAACTTCGAAACCGGGTTCATCGGATGTAGAATACCGGGGTTCCCGTAGCAACCAGGA
TCGGGATTATCGGAATAAATCTGATCGGGATTATCGTGATGTGGATTACCGGGACAACCA
AGCGAAGGATGTGAGGAGAGTTACAAGTGTTGATAAAGATTATAGACCCCGTGACCACAC
CACCACCAGCACTGGTAGCAATGGTCACCCCCTCACCCATGGTAAGGATAGCTACATACC
TTCAACTGGGGAATTCTATGATTACTCAACGTGGGGTGGCCGCACCTCCAACACGCCCCT
TGTTAATGGGGTCAGCTCGACAGAGAACACGCAGTCCTCACAGCAGCCACAAGATGGGGA
TAAAGCAACCACAGTAACCGTCGAAACCTCGGAATCGAAGCCGGAAGAAGAATCAGCGAC
GTCAGCGTTCGTACGAACACTTTCCAATGTTCTAACTCAAGCTTCAAATAAATCAACAGA
TGCTGAAGGAAATCTGAAAAATGCGTTGCAACTTTTGTTAAACGCTGCTTCGAAAAGCCA
AACAGAAACCACAGAACCTGAGAATGGCAACCATGAATCAACCACGGAAACCAACACCAC
CGACCCACCTCCCAATAAACGCCCTCGTGTCTCATCTGACGATACAAAAAAAGATACCGG
GGAACCCCCTGAAGTGATACCCACCTTCCCACACCTGGAGGAATTACAAAAAGTGTTTGA
TCCAAACTTAACGACGCACGCTCAAGGATGGTCCACGGAACCTGCAGAGAAACAGTGCAA
TCGGTTAACGGAGGATTACCACAAGTTTATCGCTGATCACATGACCAACCTTAACGCCCA
GATGACCACAGCGAGGTCAAAAGTTCGGGCTTCGGAAATTTTATCAACACTACAAGAACA
AAGAATCTTATACCTTCGTCAACAAATCAGTGATTTAGAGAAAAATTCCACCACGACGAC
TCCATTCACTTGAAGTGTGATGTCATAGTAACATGATGATGTCATAATGATATCATACAT
TTTAAAGAATCAAGCTTCATGATGTCATAGTCGGTTCTCTGATATCACAGTTAAACTGCG
CAGGAGGTTCCAGGTGTTCTAGCGCCTCTAGTGATGAGATTAGCTATGCACGAACGGTTC
CAAAGAATTGCGTTTGTTCTTGTGTTATGACGTAACAATCATACAAATACACAGCGGGTT
CAATTACAACATATACAATGTAGGCTTGCCTTTACAAAAAGGGAACCATTTTAATAAATT
AACTTAGTTTGTAGGGCCATTGTTGGCCTTATGTGCACTGTTGTTATTGTTGTCGTTATT
TTGTTTAAAATCAATTGAAGTTTAATTTACTTGCCACCCATGAGGTGCTTTCCCTAATTT
GGAACTGCATTCCAA
| SMART |
WW_dom (IPR001202) - T[79-111] 1.9E-6 |
| SUPERFAMILY |
WW_dom_sf (IPR036020) - T[83-113] 3.12E-9 |
| Pfam |
WW_dom (IPR001202) - T[83-109] 7.7E-9 |
| CDD |
WW_dom (IPR001202) - T[84-111] 1.94133E-7 |
| ProSiteProfiles |
WW_dom (IPR001202) - T[84-111] 12.098 |
| ProSitePatterns |
WW_dom (IPR001202) - T[84-109] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| WAC_HUMAN | 50 % | 83.6 | 4.79E-17 |