- Transcript 'KH2012:KH.C9.287.v5....'
Transcript Model
Transcript Id
KH2012:KH.C9.287.v5.A.SL1-2
Possible name(s)
HERC3; HERC6; RCCD1
Gene model
Location
KhC9 [4,989,034 / 4,991,390]
Amino acid sequence
Length: 320
>KH.C9.287.v5.A.SL1-2
EKLLRRGLTNNLGRELTKENISSKCIQSILNFDNHGYGILQDNGEFVLQFEPERSEIFTK
RHVGSVAKDSNGFYLVADDVLLHCNNILESPIIMRPMFSSHKVRNVSCGNCHSLLSTHNG
NVFSWGIGSHGQLGHGDMETLKQPQLIDALGGVCIKRVGAGGWHSAALADTDDLYVWGWN
QSGQTGFQAPVGICTNSTEALKMENSTKDSNAIGVVLNPTLLELEMCADSNSFVSIIDVS
CGVRHTAAVTSCGTLITWGWARYGQICHSCCKPDTDIPTDSVHCEAHLPQTVMWFKTHGL
YVTGVVCGPWNTFVTTSDYG
Nucleotide sequence
Length: 1,332
>KH2012:KH.C9.287.v5.A.SL1-2
ATGAAAAACTATTGCGCCGTGGGCTTACTAACAATCTGGGTAGAGAGTTGACGAAGGAAA
ATATATCATCCAAATGCATCCAATCGATTTTAAACTTCGATAATCATGGTTATGGAATAC
TACAGGATAATGGAGAATTTGTGCTGCAGTTCGAGCCTGAGAGAAGTGAAATATTTACAA
AACGCCATGTTGGATCTGTAGCAAAAGATTCAAATGGATTTTATTTAGTAGCAGATGATG
TGCTACTACATTGCAATAACATCTTGGAGAGTCCTATTATTATGAGGCCAATGTTTTCAA
GCCACAAAGTAAGGAATGTTTCATGTGGTAATTGTCACAGCTTATTATCAACACATAACG
GAAACGTCTTCAGCTGGGGAATTGGCAGTCATGGACAACTTGGACATGGTGATATGGAAA
CATTAAAGCAACCACAGTTGATAGATGCCCTTGGTGGTGTTTGTATTAAGCGTGTAGGGG
CTGGTGGGTGGCACTCAGCTGCTCTGGCAGACACTGATGATTTGTATGTCTGGGGTTGGA
ACCAGTCAGGTCAGACTGGATTTCAAGCCCCAGTTGGTATTTGCACCAACTCCACTGAAG
CACTTAAAATGGAAAATTCTACAAAAGATTCCAATGCCATAGGTGTTGTTCTAAACCCAA
CATTGTTAGAACTTGAAATGTGTGCGGATTCAAACAGCTTTGTTTCTATTATTGATGTAT
CCTGTGGTGTTAGGCACACTGCTGCAGTTACTTCGTGTGGGACTTTAATCACATGGGGTT
GGGCACGATATGGTCAAATATGTCACTCATGTTGTAAACCAGACACTGATATCCCAACAG
ACAGCGTACATTGTGAAGCGCATTTGCCACAGACTGTGATGTGGTTTAAAACACATGGTT
TATATGTAACTGGTGTAGTGTGTGGTCCATGGAATACGTTTGTAACCACGAGTGATTATG
GTTAATCATTATGTTAATACATTGATGCGGTTTCCAGTTCTATTACTTTATGAATTTAAA
AATCTTTGCAAGCTGGTATGTCTTATCGCACGATTTTACAAAAGATAGTTGCAGAACTAT
GCAAACCAAACTGTGTTTGATTTAATCAAGCAGTTTGATAATTTAACCTTATTTTATTTA
CATGCAAGTAAAATATTTTTGTGCCACAAGATTAAAATTCCAGTGTCATACCAAAATTCG
TATAGTGTTAAACTTAATCATGTTAGGCATTTATTAGCGTACTTCGCACTTTAATTCATT
ATCGTAGCTGGTGACTTTTTAAAAAACAAAATGCATAAAAAAGTGGAACGGAATACAACT
TTGCTCTCTTTT
| SUPERFAMILY |
RCC1/BLIP-II (IPR009091) - T[50-317] 1.74E-41 |
| Gene3D |
RCC1/BLIP-II (IPR009091) - T[81-319] 3.4E-41 |
| Pfam |
Reg_chr_condens (IPR000408) - T[119-168] 9.2E-11 |
| ProSiteProfiles |
Reg_chr_condens (IPR000408) - T[120-171] 16.011 - T[172-252] 8.534 |
| PRINTS |
Reg_chr_condens (IPR000408) - T[121-137] 8.0E-7 - T[155-168] 8.0E-7 - T[174-190] 8.0E-7 |
| ProSitePatterns |
Reg_chr_condens (IPR000408) - T[158-168] . - T[239-249] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| HERC4_HUMAN | 26.144 % | 86.7 | 1.04E-18 |
| HERC5_HUMAN | 29.333 % | 92.4 | 1.08E-20 |
| RCCD1_HUMAN | 32.817 % | 164 | 5.38E-48 |