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TRANSCRIPT CARD

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  1. Transcript 'Boleac.CG.SB_v3.S442...'
  2. Region 'REG00001420'
  3. Transcript 'KH2012:KH.C12.156.v2...'
  4. Transcript 'Cisavi.CG.ENS81.R117...'
  5. Transcript 'KH2012:KH.C9.257.v1....'

Transcript Model

Transcript Id

KH2012:KH.C9.257.v1.A.ND1-1

Possible name(s)

WNT2; WNT4; WNT6

Location

KhC9 [4,415,017 / 4,424,416]

Sequences

Amino acid sequence

Length: 611

>KH.C9.257.v1.A.ND1-1
GFGMTLQRSCFVDLSEKRDMSDVGGATYDEEALSVSEMLSSHMDVSRATELSQSMASERF
SPTESPITACCSADQTGIFSCTFCRKPLRAANTIRRSKLRSRNLDDCGTAPHESTAVTST
DRSDNELEMRLGQNRSINSEHSEAVMQNDSDIPNLSSENLCRKHRRNSVERGVTKQSTWR
VHRRILPAIHSSVTIVLLQVLLFCTVNVAAVWWNPGYRPTLMDSERICLWAQQIGGPQAE
MCANEMPVVEEIKKGIQRGAYNCAREFRYSRWNCSQTPKKFYEKALWQTTKETSYLQAVT
SAAMTFAITEACSLGNIPECGCVNTRGQKREYLRREAQKRNYYINESYLDTFVDQFDWEG
CDDNVDFAYRKTRHFLNFTRFIGRKRKINLRLRMSAHNYEAGRLAITEKMAEKCKCHGFS
GTCTIRTCWMRMPKFDAVRATLRRMYNTATKVNLQPGTRRLVIARRPRRPSSRHRNTASR
RTNKVKRGLRKNIPTRFRSRNRKAKNPRRRIRLKNRLRRRLYPVASKHLVYHQPSPNFCR
RDKRKGSLGTKGRVCDPTRREGYGSCQYMCCGRGYTTEVVEHTMKCNCTFIYCCTMTCDE
CINRYTRYVCR

Nucleotide sequence

Length: 2,514

>KH2012:KH.C9.257.v1.A.ND1-1
GTTTGATCAGAAGATCAAGAACAGACCTGTGGTGATATACATATAAGGCTTGGAGAATAA
CTCCGTCTCTGAACTGTTGTCTTCATTTACATTAAAGAGGATAAGGATTTGGAATGACGC
TGCAGAGGTCTTGTTTTGTGGATTTGTCTGAAAAACGAGATATGTCAGACGTGGGTGGCG
CTACTTATGACGAAGAAGCATTATCTGTTTCGGAAATGCTAAGCAGCCACATGGACGTAT
CTCGAGCAACGGAACTAAGCCAGTCAATGGCAAGCGAAAGATTTTCTCCAACTGAATCGC
CCATCACTGCTTGTTGCAGTGCGGACCAGACCGGAATATTTAGCTGTACATTTTGTAGAA
AGCCTCTTCGGGCAGCTAACACGATCCGACGATCCAAGTTGAGATCACGGAACCTCGACG
ACTGTGGCACAGCGCCACACGAAAGTACTGCTGTAACTAGTACAGACAGGAGTGACAATG
AATTAGAAATGAGACTAGGGCAAAATCGGTCAATAAATTCGGAACACTCGGAAGCGGTCA
TGCAAAATGACAGTGACATACCTAACTTGTCAAGCGAAAATTTATGCCGGAAACACCGAC
GAAATTCCGTGGAGCGGGGAGTTACCAAACAATCCACGTGGCGTGTGCACCGACGAATAC
TTCCCGCCATTCATTCAAGCGTGACGATAGTTCTGCTTCAAGTGCTTTTGTTCTGTACAG
TCAACGTCGCCGCTGTGTGGTGGAATCCTGGATATCGACCAACACTTATGGACAGCGAGA
GAATCTGTCTTTGGGCTCAACAAATCGGAGGACCCCAGGCGGAAATGTGCGCCAACGAAA
TGCCTGTAGTTGAAGAGATTAAGAAGGGAATTCAAAGGGGTGCTTACAACTGTGCGCGGG
AATTCCGCTATTCGAGATGGAACTGCTCGCAAACCCCGAAAAAATTCTACGAAAAAGCTC
TTTGGCAAACAACGAAGGAAACCAGCTACCTTCAAGCGGTGACGTCAGCAGCTATGACGT
TTGCCATAACGGAGGCGTGCAGCCTTGGCAACATACCCGAATGCGGCTGTGTCAACACAC
GCGGACAGAAGAGGGAATACCTCAGAAGGGAAGCCCAAAAGCGCAACTATTACATAAACG
AAAGCTACCTCGACACTTTCGTTGACCAATTCGACTGGGAAGGTTGTGATGACAACGTGG
ACTTTGCTTACCGGAAGACAAGGCATTTTCTCAACTTCACGCGGTTTATTGGACGGAAGA
GAAAGATTAATCTTCGATTGCGAATGAGCGCTCATAATTATGAAGCCGGCCGCCTGGCGA
TCACTGAGAAGATGGCTGAAAAGTGCAAATGCCACGGATTCTCTGGCACGTGCACTATTC
GCACTTGCTGGATGCGAATGCCAAAGTTTGACGCTGTGCGGGCGACGTTACGCCGGATGT
ATAACACTGCGACCAAAGTCAACCTTCAGCCCGGGACTAGGAGGCTTGTCATCGCCAGGA
GACCACGGCGTCCTTCGTCTCGACACAGGAACACAGCATCTAGAAGAACGAACAAAGTAA
AAAGAGGACTGCGGAAAAACATCCCGACTCGTTTTCGGTCTCGAAACCGTAAAGCCAAAA
ATCCTCGTCGGCGTATTCGTTTAAAGAATCGGTTGCGAAGACGCCTTTACCCCGTCGCAA
GCAAGCATTTAGTCTACCACCAGCCATCGCCGAACTTCTGCCGGCGAGACAAGCGTAAAG
GCAGTCTAGGTACCAAAGGTCGCGTGTGCGATCCGACTCGACGGGAAGGGTACGGAAGCT
GTCAGTACATGTGCTGCGGCCGCGGCTATACGACTGAGGTAGTCGAACACACAATGAAAT
GCAACTGTACTTTCATCTACTGCTGCACTATGACATGCGACGAATGTATAAACCGGTACA
CACGATACGTTTGCAGATAAGCTGTACCAAGCTTGCCATTGTGCTTGCAATCGCTACTAT
CCACCGTCGATACAACAGTTACATTTGCAAAGCTGTAAAATGTCAAGCGGGTATCTATGG
TCAACATGTGTAAAGTTTTTCACACGTAGTTACATCGTCCATCATTTATACAACTAAACT
GTAGTTGGTGAAAATAAGGGAGTTCGATTAAAGCACAAGAGAATATATGCTGCAGGCAGC
TAGTTTTTTACTGATTTCAAAGACACTTTAAAACGGTATTTAAGTCCTGGTCAACAAGGT
TTTGCATTGCGCCGTACCCCCATATGTTCCGAATGTCGACCTTGCAAGACGTGTTTTTCC
AGGCAGCAAGCCCCCCTTGCTTGCTTTCATACAACAGCACCTTTACCACTTCGAACCCTT
TTGGTCAACCTCATTTTCACCGTTCTGGTTATTTATTTTTTCCTGCCGTTATTTCTATAC
AGCTATTTACGTACTTCTTTTTCAACGTGCGCCTATGTTTCACTTCTCTACTTATCATTT
TGCCGTTGCGCATTCGTTCTGGACAGTAAACTGAAACCGTGCTTCGGAACATTT

InterProScan

PANTHER
Wnt (IPR005817) - T[188-611] 1.3E-167
SMART
Wnt (IPR005817) - T[230-611] 1.9E-74
Pfam
Wnt (IPR005817) - T[233-611] 1.7E-95
PRINTS
Wnt (IPR005817) - T[291-305] 3.6E-19 - T[310-323] 3.6E-19 - T[356-368] 3.6E-19 - T[415-429] 3.6E-19 - T[528-539] 3.6E-19

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
WNT4_HUMAN 29.665 % 189 6.95E-55
WNT2_HUMAN 29.975 % 191 1.55E-55
WNT6_HUMAN 30.864 % 196 3.82E-57