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  1. Clone 'mae8j17' > 
  2. Transcript 'KH2012:KH.C9.249.v2....'

Transcript Model

Transcript Id

KH2012:KH.C9.249.v2.A.SL3-1

Possible name(s)

CSMD1; CSMD2; CUBN

Gene model

KH2012:KH.C9.249

Location

KhC9 [1,591,312 / 1,598,067]

Sequences

Amino acid sequence

Length: 476

>KH.C9.249.v2.A.SL3-1
VRWDNSVVRLRDRRSNITFVSNAINLFFRTDGSVRLWGFVANYIIVNSTVGSYTTPPTTT
VAPCGFSANATNFSRPLNSPGYPRSYGNYLNCNWYLTARPGYFVQFILVRLTTERCCDRL
RVYGSFPYMRQFAGYVTRSTTVVSVNNTMRLYFRSDGSVTRSGFRGYFRETSVAMTTPAP
TTTTPPTTPVPCGGNLTATNVSQDFYTPGWSSRYRNNLRCYWYIYARPGWQVHIQVVSVD
TESCCDRLRITAPGQTYTINGRSSVIRNYISPANRFTLYFRTDSSVTRRGIYLRYQETRN
NQIPTTPTIPPTTPEPCGTNYEVLSSEQPLRSPNYPNPYLSSRVCVWILTAPQNSKIKLR
LSSFSTENCCDILDITNVLNRRVVELGGNLSSTVYYSSTNMMTLTFRTDDNNNMQGFEFF
FSIATGPIPTQRPAVAPTNGNNQQVQLATTSKARILHPVNTGLVFAVAFSIYSLLL

Nucleotide sequence

Length: 2,693

>KH2012:KH.C9.249.v2.A.SL3-1
AGCTTTGCTGTCTTTAGGTTAGGTGGGATAATAGTGTGGTGCGTCTTCGTGACAGAAGAT
CAAACATAACGTTCGTGAGCAATGCCATTAATCTTTTTTTCCGAACGGACGGATCTGTAA
GATTGTGGGGGTTTGTTGCAAACTACATAATTGTCAACTCCACAGTCGGCTCATACACAA
CCCCCCCTACCACAACCGTCGCACCATGTGGATTCAGTGCCAACGCCACAAATTTTTCGC
GACCTCTCAACTCACCTGGCTACCCCAGGTCATACGGCAATTATCTTAACTGTAATTGGT
ACCTAACGGCCAGACCTGGTTACTTTGTACAGTTCATATTGGTACGACTTACAACAGAAC
GTTGCTGTGACCGGCTGAGGGTTTATGGGTCGTTCCCATACATGCGTCAATTCGCAGGCT
ACGTCACCAGAAGTACAACAGTGGTGTCTGTAAACAACACAATGCGTTTGTATTTCAGAA
GTGATGGTAGTGTAACAAGATCAGGGTTCCGGGGTTATTTTAGAGAAACTTCAGTCGCCA
TGACGACGCCGGCTCCAACCACAACAACACCACCCACAACTCCAGTTCCTTGTGGTGGCA
ACCTGACGGCAACCAATGTGTCACAAGATTTCTACACTCCTGGTTGGAGTTCAAGATACA
GAAATAATCTTAGATGTTATTGGTATATATATGCAAGGCCAGGATGGCAAGTTCACATAC
AAGTTGTCAGTGTTGATACTGAAAGCTGCTGTGATCGTCTGCGAATTACAGCTCCTGGTC
AAACCTATACTATAAATGGTAGAAGCTCTGTCATCCGTAACTACATCAGTCCAGCAAACA
GATTCACCCTTTACTTCAGGACAGATTCTTCTGTTACTCGAAGAGGAATTTACTTAAGAT
ACCAAGAAACACGGAACAACCAGATACCTACAACACCAACAATACCCCCTACCACTCCAG
AGCCTTGTGGAACAAACTATGAGGTTTTATCTTCTGAACAACCACTCAGATCCCCTAACT
ATCCAAACCCATATCTCAGCAGCAGGGTTTGTGTGTGGATACTTACAGCTCCTCAAAACT
CAAAGATCAAACTCAGACTTAGTTCATTTTCAACTGAAAACTGCTGTGACATCTTAGATA
TTACTAACGTTCTAAACAGAAGAGTTGTTGAATTGGGTGGCAATCTCTCAAGCACAGTTT
ATTATTCAAGCACGAACATGATGACTTTGACCTTTAGAACTGATGATAACAATAACATGC
AAGGTTTTGAATTCTTCTTCTCAATTGCAACCGGACCAATTCCTACACAGAGACCTGCAG
TTGCCCCTACCAACGGAAACAATCAACAAGTTCAACTGGCCACCACCAGCAAAGCAAGGA
TTCTTCACCCAGTTAACACAGGCTTAGTATTTGCTGTTGCTTTCTCAATATATTCACTAT
TACTATAATATCCCATCATTGTGTTATATCTCTACCATATAAGAGATTTAAAGTAAATTA
ATTTTACAAACACACATCAGTGTTTCTATTTTAAACTGCTGTATTAACTTATGTTAGCTT
TGCCAAAACAAACCAGTTCCATATTAATCTAAACCACATAAAAAACATCAGTTGTAATTT
CTGTATAAAGAAGTGATAGTTTTATATTACTTTTTTTATTTCTGTATTTAGTGTATATAG
TAAAAAAGCCCATTTAAATAACCTGATAAAATCAAAGGCACCTCAACTTATAATCAATAA
ATTTGGCATATATCAGTGGGGCAAGACCGTTGTTGGCTGTTCTGTTTCATACCCGCTTAC
TAGTTATTCTATTTATACCTTTGTGGGCAATTCTTTATTAACATGTTGCTACCAATTTGG
TCATTAGTGACCATTGAATTGGAGCAACTGTTAAATGTCCTGCCCAGGAACCCTTACCCA
CGATAATACCAACATTAACCTTTGAATTCACCTCTGGGTTAAAAGCAGACATGCCGTACA
CCCTGCCACGTCGTCATTCTATTACATAACAGAACTGCTGGGTAGTTGAGGCTTCTTCTA
ATTTGTGTTTGTGATAAACAACACAGTCTCAATTATTTTATAATTCTTTCTTTATATTAT
GAGAAGTTACATATATGGGCTCTATATATACAACTGTACCAACCGGCCATTTTATTCTGT
ATACCATTATTATGTATTAAAGAAACTCTCCGTATACAGAAACATATTCTTTGTGTTGAA
TACAAAAACTGCATTAAATATACCTAATGTTCATTAAAACAAATTTGTAGCTAATTCAGC
AGAAATTGACTACAGTTCATTGCGTTCAATTACGTCATTATATTTTACGTCATCATATTT
CACGTCATCTTGTTTCACGTCATCATGTTTTACGTCATCATGCTTCACGTCATCATGGCT
GTATTCAAATGGTTCCTCAGCCATGCCCTGCTCTACATTATACCAATCTTCCAGCGCTGT
TTTGATATTTTCATCCGTAACGCTTTCGCTTCTGACTTCATTAATCTCACTCGAACCCAC
AAGACGCGTGAAGATTCTGTCTCCCATAAAAGGAGTTCCCTTTAAAACTCCCCGGTACAC
GTTTATCCAGGTTTCTCTTTTTAAGTTCTTTACTTTGCCAAGTGCCCTGTGGAGTATATG
TTCCACATTTGTTCGAGGTATCAGCGTCGCCTCAAGTAAAATTGAGTTAATAG

InterProScan

SUPERFAMILY
Sperma_CUB_dom_sf (IPR035914) - T[63-169] 5.23E-21 - T[191-296] 1.18E-19 - T[316-422] 1.96E-23
SMART
CUB_dom (IPR000859) - T[64-171] 6.7E-15 - T[192-298] 2.7E-12 - T[317-424] 1.3E-20
CDD
CUB_dom (IPR000859) - T[64-169] 4.24672E-15 - T[192-296] 2.89003E-16 - T[317-423] 4.24053E-19
ProSiteProfiles
CUB_dom (IPR000859) - T[64-171] 15.256 - T[192-298] 13.533 - T[317-424] 14.183
Pfam
CUB_dom (IPR000859) - T[64-167] 1.2E-10 - T[192-295] 2.8E-10 - T[317-419] 4.0E-16
Gene3D
Sperma_CUB_dom_sf (IPR035914) - T[67-172] 6.9E-17 - T[192-301] 4.5E-14 - T[323-424] 6.0E-20

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
CUBN_HUMAN 25.849 % 89 1.75E-18