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- Transcript 'KH2012:KH.C9.249.v1....'
Transcript Model
Transcript Id
KH2012:KH.C9.249.v1.A.ND1-1
Possible name(s)
CSMD1; CSMD2; CUBN
Gene model
Location
KhC9 [1,590,257 / 1,598,067]
Amino acid sequence
Length: 566
>KH.C9.249.v1.A.ND1-1
IKKMNWLSSTLIFVGLVYYQLADGQTYTCSRPSRLIATNQTQLLKSPGRSSNINYPNNLR
CIWNITAPPGMLVRFTVQTLRTERCCDYLQVRWDNSVVRLRDRRSNITFVSNAINLFFRT
DGSVRLWGFVANYIIVNSTVGSYTTPPTTTVAPCGFSANATNFSRPLNSPGYPRSYGNYL
NCNWYLTARPGYFVQFILVRLTTERCCDRLRVYGSFPYMRQFAGYVTRSTTVVSVNNTMR
LYFRSDGSVTRSGFRGYFRETSVAMTTPAPTTTTPPTTPVPCGGNLTATNVSQDFYTPGW
SSRYRNNLRCYWYIYARPGWQVHIQVVSVDTESCCDRLRITAPGQTYTINGRSSVIRNYI
SPANRFTLYFRTDSSVTRRGIYLRYQETRNNQIPTTPTIPPTTPEPCGTNYEVLSSEQPL
RSPNYPNPYLSSRVCVWILTAPQNSKIKLRLSSFSTENCCDILDITNVLNRRVVELGGNL
SSTVYYSSTNMMTLTFRTDDNNNMQGFEFFFSIATGPIPTQRPAVAPTNGNNQQVQLATT
SKARILHPVNTGLVFAVAFSIYSLLL
Nucleotide sequence
Length: 2,956
>KH2012:KH.C9.249.v1.A.ND1-1
GTTTATTTAAATTAAGAAAATGAATTGGTTAAGTAGTACGCTGATTTTCGTCGGTTTGGT
TTATTATCAACTAGCTGATGGCCAAACGTATACGTGCAGTAGACCGTCAAGGTTGATCGC
AACAAACCAAACGCAACTTCTAAAATCTCCTGGTCGGTCTAGCAACATCAACTACCCGAA
TAATTTGCGTTGTATTTGGAACATAACTGCCCCACCTGGTATGCTGGTTCGCTTTACTGT
ACAGACTTTAAGAACGGAAAGGTGTTGCGACTATTTACAAGTTAGGTGGGATAATAGTGT
GGTGCGTCTTCGTGACAGAAGATCAAACATAACGTTCGTGAGCAATGCCATTAATCTTTT
TTTCCGAACGGACGGATCTGTAAGATTGTGGGGGTTTGTTGCAAACTACATAATTGTCAA
CTCCACAGTCGGCTCATACACAACCCCCCCTACCACAACCGTCGCACCATGTGGATTCAG
TGCCAACGCCACAAATTTTTCGCGACCTCTCAACTCACCTGGCTACCCCAGGTCATACGG
CAATTATCTTAACTGTAATTGGTACCTAACGGCCAGACCTGGTTACTTTGTACAGTTCAT
ATTGGTACGACTTACAACAGAACGTTGCTGTGACCGGCTGAGGGTTTATGGGTCGTTCCC
ATACATGCGTCAATTCGCAGGCTACGTCACCAGAAGTACAACAGTGGTGTCTGTAAACAA
CACAATGCGTTTGTATTTCAGAAGTGATGGTAGTGTAACAAGATCAGGGTTCCGGGGTTA
TTTTAGAGAAACTTCAGTCGCCATGACGACGCCGGCTCCAACCACAACAACACCACCCAC
AACTCCAGTTCCTTGTGGTGGCAACCTGACGGCAACCAATGTGTCACAAGATTTCTACAC
TCCTGGTTGGAGTTCAAGATACAGAAATAATCTTAGATGTTATTGGTATATATATGCAAG
GCCAGGATGGCAAGTTCACATACAAGTTGTCAGTGTTGATACTGAAAGCTGCTGTGATCG
TCTGCGAATTACAGCTCCTGGTCAAACCTATACTATAAATGGTAGAAGCTCTGTCATCCG
TAACTACATCAGTCCAGCAAACAGATTCACCCTTTACTTCAGGACAGATTCTTCTGTTAC
TCGAAGAGGAATTTACTTAAGATACCAAGAAACACGGAACAACCAGATACCTACAACACC
AACAATACCCCCTACCACTCCAGAGCCTTGTGGAACAAACTATGAGGTTTTATCTTCTGA
ACAACCACTCAGATCCCCTAACTATCCAAACCCATATCTCAGCAGCAGGGTTTGTGTGTG
GATACTTACAGCTCCTCAAAACTCAAAGATCAAACTCAGACTTAGTTCATTTTCAACTGA
AAACTGCTGTGACATCTTAGATATTACTAACGTTCTAAACAGAAGAGTTGTTGAATTGGG
TGGCAATCTCTCAAGCACAGTTTATTATTCAAGCACGAACATGATGACTTTGACCTTTAG
AACTGATGATAACAATAACATGCAAGGTTTTGAATTCTTCTTCTCAATTGCAACCGGACC
AATTCCTACACAGAGACCTGCAGTTGCCCCTACCAACGGAAACAATCAACAAGTTCAACT
GGCCACCACCAGCAAAGCAAGGATTCTTCACCCAGTTAACACAGGCTTAGTATTTGCTGT
TGCTTTCTCAATATATTCACTATTACTATAATATCCCATCATTGTGTTATATCTCTACCA
TATAAGAGATTTAAAGTAAATTAATTTTACAAACACACATCAGTGTTTCTATTTTAAACT
GCTGTATTAACTTATGTTAGCTTTGCCAAAACAAACCAGTTCCATATTAATCTAAACCAC
ATAAAAAACATCAGTTGTAATTTCTGTATAAAGAAGTGATAGTTTTATATTACTTTTTTT
ATTTCTGTATTTAGTGTATATAGTAAAAAAGCCCATTTAAATAACCTGATAAAATCAAAG
GCACCTCAACTTATAATCAATAAATTTGGCATATATCAGTGGGGCAAGACCGTTGTTGGC
TGTTCTGTTTCATACCCGCTTACTAGTTATTCTATTTATACCTTTGTGGGCAATTCTTTA
TTAACATGTTGCTACCAATTTGGTCATTAGTGACCATTGAATTGGAGCAACTGTTAAATG
TCCTGCCCAGGAACCCTTACCCACGATAATACCAACATTAACCTTTGAATTCACCTCTGG
GTTAAAAGCAGACATGCCGTACACCCTGCCACGTCGTCATTCTATTACATAACAGAACTG
CTGGGTAGTTGAGGCTTCTTCTAATTTGTGTTTGTGATAAACAACACAGTCTCAATTATT
TTATAATTCTTTCTTTATATTATGAGAAGTTACATATATGGGCTCTATATATACAACTGT
ACCAACCGGCCATTTTATTCTGTATACCATTATTATGTATTAAAGAAACTCTCCGTATAC
AGAAACATATTCTTTGTGTTGAATACAAAAACTGCATTAAATATACCTAATGTTCATTAA
AACAAATTTGTAGCTAATTCAGCAGAAATTGACTACAGTTCATTGCGTTCAATTACGTCA
TTATATTTTACGTCATCATATTTCACGTCATCTTGTTTCACGTCATCATGTTTTACGTCA
TCATGCTTCACGTCATCATGGCTGTATTCAAATGGTTCCTCAGCCATGCCCTGCTCTACA
TTATACCAATCTTCCAGCGCTGTTTTGATATTTTCATCCGTAACGCTTTCGCTTCTGACT
TCATTAATCTCACTCGAACCCACAAGACGCGTGAAGATTCTGTCTCCCATAAAAGGAGTT
CCCTTTAAAACTCCCCGGTACACGTTTATCCAGGTTTCTCTTTTTAAGTTCTTTACTTTG
CCAAGTGCCCTGTGGAGTATATGTTCCACATTTGTTCGAGGTATCAGCGTCGCCTCAAGT
AAAATTGAGTTAATAG
| ProSiteProfiles |
CUB_dom (IPR000859) - T[29-136] 11.245 - T[154-261] 15.256 - T[282-388] 13.533 - T[407-514] 14.183 |
| SMART |
CUB_dom (IPR000859) - T[32-136] 4.4E-10 - T[154-261] 6.7E-15 - T[282-388] 2.7E-12 - T[407-514] 1.3E-20 |
| Gene3D |
Sperma_CUB_dom_sf (IPR035914) - T[34-137] 1.8E-13 - T[157-262] 9.2E-17 - T[282-391] 6.0E-14 - T[413-514] 7.9E-20 |
| Pfam |
CUB_dom (IPR000859) - T[38-133] 7.3E-8 - T[154-257] 1.6E-10 - T[282-385] 3.8E-10 - T[407-509] 5.3E-16 |
| CDD |
CUB_dom (IPR000859) - T[38-135] 2.92433E-11 - T[154-259] 2.81346E-15 - T[282-386] 1.79908E-16 - T[407-513] 2.83244E-19 |
| SUPERFAMILY |
Sperma_CUB_dom_sf (IPR035914) - T[39-136] 8.24E-17 - T[153-259] 7.07E-21 - T[281-386] 1.57E-19 - T[406-512] 2.62E-23 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CUBN_HUMAN | 24.853 % | 112 | 9.59E-26 |