- Clone 'cien72194' >
- Transcript 'Cisavi.CG.ENS81.R16....' >
- Transcript 'KH2012:KH.L18.39.v1....' >
- Clone 'cilv024e04' >
- Transcript 'KH2012:KH.C9.228.v1....'
Transcript Model
Transcript Id
KH2012:KH.C9.228.v1.B.nonSL2-1
Possible name(s)
ZIM3; ZNF226; ZNF317
Gene model
Location
KhC9 [5,579,179 / 5,584,791]
Amino acid sequence
Length: 476
>KH.C9.228.v1.B.nonSL2-1
FTSPKTVPVKMRQKIEEIIGQRNIDIIHSAYVVHTLYQQQKLGKYCDLKVLVGDKQYFVH
RCVLAAASAQLDSQINGLDTIQLVGVTYYGFEGLLEILYSGKLKDIACLSDIRFQQIVSA
ADALNAETVMEYCTRERGDLMNLLMHQSANNAANLQKQNSPKNETEGNAVENKDSSYNNS
NSNTETDNLNTCSPNTADDMNNKDIAEYRRTNSMSRSSRIENNHTEGSEAASTCSVCGAV
LLNPLDLQSHMQSHAEASMYRCEICGLHFKFQTNLFKHKKLHNSELICHICGLEFKVVEQ
LQNHMQILHQQDGTFSDRENTPYYKEPQPVQPPQKTKRKTTIMDTSDITPIAVNDIMRGP
NGKYNCPLCERGFDRRWNLKCHVLIHTAARRTGGETMSDMRYIEGGFDCPVCGKAFRNLH
NLRRHASSQHGMSAAALSEASESKLNEHSATVAAKRAKTATQRKSENPPSLDNNFR
Nucleotide sequence
Length: 2,125
>KH2012:KH.C9.228.v1.B.nonSL2-1
GAGACTCGCCAAAGAAAGAAGGCGCAACCAGTACACAGCGCAGCCACTAGGCAAGAGAGG
TTACGCGGTACGTATTACCAGTCGCCATTACTGTGAGATAGGCTAAACTGTACAGTCGCC
CCGAGGTGTACAGTACGTAGTTCACAAGTCCGAAAACTGTACCAGTCAAAATGAGACAGA
AAATCGAGGAAATTATTGGTCAAAGAAACATTGACATAATCCACTCTGCATATGTTGTAC
ACACATTGTACCAACAACAAAAACTTGGAAAATATTGTGACCTGAAAGTTCTGGTTGGAG
ATAAGCAGTACTTTGTGCATAGATGTGTTCTGGCAGCTGCTTCAGCACAACTTGATTCAC
AAATCAATGGCCTCGACACAATTCAGTTAGTTGGAGTAACTTATTATGGATTTGAGGGGC
TTTTGGAAATTCTCTACTCTGGAAAACTAAAGGACATTGCGTGTTTAAGTGACATAAGAT
TCCAACAGATTGTCAGTGCCGCAGACGCCTTGAATGCTGAAACTGTTATGGAATACTGTA
CCAGGGAAAGAGGGGATCTAATGAACTTGTTAATGCATCAAAGTGCAAACAATGCAGCAA
ACTTACAAAAACAGAATTCACCAAAGAATGAAACCGAAGGAAATGCAGTGGAAAATAAAG
ATTCGTCATACAATAACAGCAACTCCAATACTGAAACAGACAATTTGAACACTTGTAGTC
CAAACACAGCTGATGACATGAATAATAAAGATATTGCTGAATACAGAAGAACAAACAGTA
TGTCTAGGTCCAGTAGGATTGAAAATAATCACACGGAAGGATCTGAAGCTGCTTCAACTT
GTAGTGTGTGTGGAGCAGTTCTTCTCAACCCCTTGGATCTACAGTCTCACATGCAAAGCC
ATGCTGAAGCCTCTATGTATAGATGCGAAATTTGTGGTTTGCATTTCAAGTTTCAAACAA
ATCTATTTAAACACAAGAAGCTTCATAATTCAGAACTCATCTGTCATATATGTGGACTGG
AATTTAAGGTTGTAGAGCAGCTGCAAAATCACATGCAAATCTTGCACCAACAAGATGGTA
CCTTCAGTGACAGAGAGAACACTCCATATTACAAGGAACCTCAACCAGTGCAACCTCCAC
AGAAAACAAAGCGGAAAACCACAATCATGGATACTTCAGATATTACGCCAATTGCTGTGA
ACGATATAATGAGAGGACCCAATGGTAAATACAACTGTCCTTTATGTGAAAGAGGTTTTG
ATAGAAGATGGAATCTCAAGTGTCATGTTCTTATCCACACTGCTGCGAGGAGAACCGGTG
GTGAAACCATGAGTGACATGCGATACATTGAAGGAGGGTTTGACTGCCCTGTGTGCGGGA
AAGCTTTCCGTAATTTGCACAACTTACGAAGACACGCGTCATCACAGCATGGGATGTCTG
CTGCCGCATTATCTGAAGCAAGTGAATCAAAATTAAACGAGCATTCAGCAACCGTTGCAG
CAAAGCGAGCGAAAACAGCAACTCAAAGGAAATCTGAAAATCCTCCAAGTCTAGATAACA
ACTTCAGGTAACTGTACAGAAAACATTTCAAAGTATGACGCGTGTAGAAGCCTGTATTAA
AATAAGATTCTGCTGCACCAATATATATAGTAGGAGGGGTTTTAATAGGAAAATAACCTT
CATATTCATATGGAAAACTATCATACTGATATTGGCTGTAAATATGAATGTCACATTTGT
GGCTAAAAATTTGATAAAAAAGAATCCCTGCCACTGTGGGTGTATGGGGTTCCAGTGATG
CCAGATTGAATTGGCTTTTTATTGTGCAGCACTGCCTTTAGTGTCAGCATATTTCTTGTG
TTTGAATTTATTGCAACGTACCACTCTTCTGTACAGTGTGTGTAAGCTGTGTGTTTTACA
GTACATTCCATGTGTATTTTACTGTTTTTCTTTGTTTGATTCTTTCTTGCAAATCTGCAA
TTTTTGTTGCTGGACACAAAAGATTTTAGAGTTCTTTTTAGTTTTAGATTATAACTCTAT
AGATTCATTTCTCAGTTCTTTATTTCTCATTGTTGTTTAAATGTATTTAACTTCATTTTA
AATAAACGTGCCTTACCACATCTTC
| SUPERFAMILY |
SKP1/BTB/POZ_sf (IPR011333) - T[28-134] 7.53E-14 |
| Pfam |
BTB/POZ_dom (IPR000210) - T[37-135] 9.9E-13 |
| SMART |
BTB/POZ_dom (IPR000210) - T[46-141] 3.3E-7 |
| ProSiteProfiles |
BTB/POZ_dom (IPR000210) - T[46-103] 12.66 |
| SMART |
Znf_C2H2_type (IPR013087) - T[232-254] 0.14 - T[260-282] 0.058 - T[286-309] 0.012 - T[364-386] 0.037 - T[407-430] 0.0013 |
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[233-282] 6.58E-10 - T[364-426] 1.53E-7 |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[260-287] 11.593 - T[286-314] 8.891 - T[364-391] 11.219 - T[407-430] 10.845 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[262-282] . - T[288-309] . - T[366-386] . - T[409-430] . |
| Protein Name | Identity | Bit Score | e-value |
|---|