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  1. Transcript 'KH2012:KH.C3.557.v2....'
  2. Transcript 'KH2012:KH.C9.224.v2....'

Transcript Model

Transcript Id

KH2012:KH.C9.224.v2.A.nonSL4-1

Possible name(s)

BCO1; BCO2; RPE65

Location

KhC9 [5,085,124 / 5,093,123]

Sequences

Amino acid sequence

Length: 531

>KH.C9.224.v2.A.nonSL4-1
KTTSPIVMDFPVSAFSHLTALATTKNIEYAEAVQGKVQGEVPSWLNGSWYRNGPGVVHFR
EESVKHWFDGMALARKFCIEDGKVSYMSRLVDGESLQKNTAAGRVVVAEFGTTTHSEGFL
GRVKSALTMPEFTDNCLINFMNLGDHLFAITESNFIRQIDPVTLDTKDKVDLAKHLPINI
MSSHPLVDGEGNVYTFSSSIFNMGRTKYNLLKFTAAAPGTPLETILSQSESICSIDSSWR
VSPSYHHSFAMSEKYAVFVEMPLKIDIPKMAVAHLRHMCYSDCIEVLEDTKTRIYLVNKE
TGKQHPITFLCDPLIVYHHVNAYDDGDHVVLDLSCYKKNSFYDKFTMSNLEKTPQEFSKL
FDSDEQAVKAMRIVLPLANDSKTTGNLVSVANTSCTAEFQGNNIFCTSEMLSVGTECAVI
NNKYIGKKYKYFYSPGGLKLPPGEMLTKIDVETKQRVQTWQEKGCWASQPVFVAKPGATQ
EDEGILMSSVVNENGNPFLLMLDAKSFTEVARIHFDANIPPDVHGVFVPKA

Nucleotide sequence

Length: 1,998

>KH2012:KH.C9.224.v2.A.nonSL4-1
TTAAAACAACAAGTCCCATAGTAATGGATTTCCCAGTTTCTGCATTCTCTCACTTGACTG
CGCTTGCTACAACCAAAAACATCGAATACGCAGAGGCGGTACAAGGAAAAGTTCAAGGTG
AGGTTCCAAGTTGGCTGAATGGTAGCTGGTACCGTAACGGACCGGGAGTTGTCCATTTCC
GAGAGGAGAGCGTGAAGCATTGGTTCGATGGCATGGCGCTTGCAAGAAAGTTCTGCATTG
AAGATGGTAAGGTCAGTTACATGAGCAGACTGGTTGACGGCGAGAGTTTGCAGAAGAACA
CAGCTGCAGGGAGGGTCGTGGTGGCCGAATTTGGAACTACTACTCACTCTGAAGGATTTC
TTGGAAGAGTAAAGAGTGCGTTAACAATGCCAGAATTCACCGATAATTGTCTCATTAACT
TCATGAATCTCGGTGATCATCTGTTCGCCATCACTGAAAGCAACTTCATTCGTCAGATCG
ATCCGGTGACCCTTGATACAAAGGACAAGGTTGATCTTGCGAAACACCTTCCTATCAACA
TAATGTCATCTCATCCCCTTGTGGATGGTGAGGGCAACGTCTACACTTTCTCCAGCTCCA
TATTTAACATGGGAAGAACCAAATACAACTTGCTCAAGTTCACTGCAGCTGCACCGGGAA
CTCCGTTGGAAACAATTCTATCGCAATCGGAATCTATTTGTAGCATCGATTCGTCATGGA
GAGTCAGCCCATCATATCATCATAGCTTTGCTATGTCAGAGAAATATGCCGTCTTCGTTG
AAATGCCGCTCAAAATTGATATTCCCAAAATGGCGGTCGCACACTTGCGCCACATGTGCT
ACAGTGATTGCATTGAAGTGTTAGAAGATACCAAGACTCGCATTTATTTGGTGAACAAGG
AGACCGGCAAGCAACATCCAATCACCTTCTTATGTGACCCGCTTATCGTGTATCATCATG
TGAATGCATACGATGATGGGGACCATGTGGTATTGGACCTCAGCTGTTACAAGAAAAACA
GCTTCTACGACAAGTTCACGATGTCCAATTTGGAAAAGACTCCGCAAGAGTTCTCCAAGT
TATTTGACAGCGATGAACAAGCTGTTAAAGCGATGAGGATTGTTCTTCCATTGGCTAATG
ATTCCAAAACGACAGGGAATCTCGTCTCGGTGGCAAACACCTCATGTACAGCCGAGTTCC
AGGGCAATAACATCTTCTGTACAAGCGAGATGCTGAGTGTGGGAACCGAGTGTGCTGTTA
TCAACAATAAATACATTGGCAAGAAGTACAAGTATTTCTACAGCCCCGGTGGATTAAAAC
TCCCACCAGGAGAAATGTTGACAAAGATTGACGTGGAAACAAAGCAGAGAGTGCAAACTT
GGCAGGAGAAAGGTTGTTGGGCGTCTCAACCTGTCTTCGTAGCGAAACCCGGAGCAACAC
AGGAAGACGAAGGTATCCTTATGTCATCTGTGGTAAATGAAAACGGAAACCCATTTTTGT
TGATGCTGGACGCCAAGAGCTTTACCGAAGTCGCCCGAATCCACTTTGACGCTAATATCC
CACCGGATGTTCACGGAGTATTTGTCCCTAAAGCATAAACGCACAATCACCCGCACCAGT
ATATAGTCAAATGATTGTGATCGTTTTATATTTTTGATGTTGCTTCAGCTTATCATAATC
ATAACCGTGTTCCTGTGGTTTGTACGTGCTGTATCATTGCTTCAGAGTTTTGTGCCACAG
TTACTGTTTATACGTTTTATTCCCCTTCAGAAAATATAACGACGGTTTCAATACCCTATA
CATACATGCTTCATCATGACCTGTTTTTTATAACTTGTCGACGGTTTTATTCACACATAA
ACAAAAACAATATTTCCATATTCTTTCGTATATACTTTCAATGCTCTGCTTTTATACCAT
TGGGATGATTTATATCAATCGTCGTGTGCTGGTTTACGCATAGAAATGTAGTCGCAATTA
AAATCAAAAGGCGTTTGC

InterProScan

PANTHER
Carotenoid_Oase (IPR004294) - T[19-530] 1.6E-136
Pfam
Carotenoid_Oase (IPR004294) - T[28-529] 1.5E-93

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
BCDO1_HUMAN 37.769 % 383 1.57E-127
BCDO2_HUMAN 32.567 % 292 5.22E-92
RPE65_HUMAN 33.981 % 274 1.63E-85