Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C9.223.v1.A.SL6-1

Possible name(s)

RAC1; RAC2; RAC3

Gene model

KH2012:KH.C9.223

Location

KhC9 [4,164,688 / 4,166,401]

Sequences

Amino acid sequence

Length: 200

>KH.C9.223.v1.A.SL6-1
HRRSRTKDMQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGRPVN
LGLWDTAGQEDYDRLRPLSYPQTDVFLICFSVASPASYENVRAKWHPEVAHHCPETPVLL
VGTKLDLRDDADTVNKLAEKKLSTITTTQGLQMAKELGAVKYQECSALTQKGLKNVFDEA
IRAVLNPTRRVVQTKNCEIL

Nucleotide sequence

Length: 1,238

>KH2012:KH.C9.223.v1.A.SL6-1
AATTGTATTTTTTAACTAACAGGTATTAGCAGGTGACTTCATTTTAGCACAGGCGTTCGC
GAACGAAAGATATGCAAGCGATAAAGTGCGTTGTGGTTGGAGATGGAGCTGTTGGTAAAA
CCTGTTTGCTGATCAGCTACACAACTAACGCTTTCCCTGGAGAATATATTCCCACTGTGT
TTGATAACTACTCTGCCAATGTCATGGTAGATGGCCGCCCTGTCAACTTGGGATTATGGG
ATACAGCAGGACAGGAGGATTATGACAGACTCCGACCTCTCTCCTACCCACAAACCGATG
TTTTTCTCATTTGTTTCTCTGTGGCTTCTCCCGCTTCCTACGAAAACGTGCGCGCAAAGT
GGCACCCGGAGGTCGCACACCACTGCCCGGAAACGCCCGTACTTCTCGTGGGAACAAAAC
TTGATTTACGTGACGATGCGGACACTGTGAACAAGCTAGCTGAGAAAAAGCTCTCCACCA
TTACTACTACCCAAGGTTTACAAATGGCGAAGGAACTGGGGGCGGTTAAATACCAAGAGT
GCTCTGCTCTGACGCAAAAGGGGCTGAAAAATGTTTTCGACGAAGCGATTCGGGCGGTTC
TTAACCCAACAAGAAGAGTCGTCCAAACGAAGAACTGCGAAATTCTATGATTACATTGAC
ACGTAGAGCGGCCTCGAACTTTTACAATAATTTGGAAATATGTTCCTATATTATAAATGG
AGTTCGGTGGCTTTATATATTCTCTCTTATCGTTTTAAGCATTTTAAAATCGTCGCTACC
GTGTAATCAAACAGACAAAAAATGCTATTATTGATTATAAATAATATAGTACTGTAGGGT
AAAGTGGAACAACTTTCGACACATAATATGTAAATATCCAGATCATGTTTTAAACAATTA
CCAGCGGTTTATGTGAGTCGTAAGGATATGGTTTTATAATTCTTCAAATGTTCTTTGTTA
ATTACCAAACCACACAAGAAAATAAAATGAAAAGGTGTTCCATTTACCCCCACTACACTT
ATGACTAAAGAAAACTTGGTCTTAAAAACAATTTTAAAGGTTAGAAAATTTAAAATACAT
GGGTAATTTATTTTTCTTGTATTGAAAAACAAAACAAAATCGGGAATTAGAAGGGGTTAT
TTGGGACAGTAAATATAATCTATTTGCCTTCCCAAAAAGGCAAACGAAGCCTAAGAGTGT
TCGAAGAAATCTAAAGCAAACTTAACGGGTAAAGTAAG

InterProScan

ProSiteProfiles	Small_GTPase_Rho (IPR003578) - T[5-184] 28.724
TIGRFAM	Small_GTP-bd_dom (IPR005225) - T[9-162] 1.2E-37
SUPERFAMILY	P-loop_NTPase (IPR027417) - T[12-185] 8.16E-58
Pfam	Small_GTPase (IPR001806) - T[13-185] 4.9E-55

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
RAC1_HUMAN	82.292 %	334	1.2E-118
RAC2_HUMAN	81.25 %	330	4.56E-117
RAC3_HUMAN	80.729 %	326	1.2E-115