- Transcript 'Phmamm.CG.MTP2014.S5...' >
- Transcript 'KH2012:KH.C9.220.v1....' >
- Transcript 'KH2012:KH.C9.220.v1....' >
- Transcript 'Phmamm.CG.MTP2014.S2...' >
- Transcript 'KH2012:KH.C9.220.v2....'
Transcript Model
Transcript Id
KH2012:KH.C9.220.v2.A.SL6-1
Possible name(s)
PAK1IP1; WDR5; WDR5B
Gene model
Location
KhC9 [5,133,052 / 5,135,343]
Amino acid sequence
Length: 355
>KH.C9.220.v2.A.SL6-1
LVETMFKIVVGCYEQLVIGYTVNIKKGEDEDLTLTYETSFTDHAQTGCIKCLTSGKSYVA
AGSTDETICLYDLNEGKELWILTGPVNQVIFPDKQRLISCSDDGTISVWEAQPSGNMIKS
LKGMFTVHPSGKLGMSVSPKDGTLRTWNLLTSRSVYVKNIKKESQIEFIRWSPDGKYYIS
ASPKQLNIFELENAECVCECDFDIPVLTIEFLPLNQTQMNRIVVGDNGGNISLYEIPSGK
KLLSYKAHENRVKCVSPMVTPEDIILNGTWLVTASSDECVKVWDVSNSELDQEKTPNCLL
TIPTGARLTCVTVWPKTEPRLPASTESLDTSESATEKKTAKRRRKRKNSAKRNPS
Nucleotide sequence
Length: 1,120
>KH2012:KH.C9.220.v2.A.SL6-1
GTTGGTGGAAACAATGTTTAAAATCGTTGTCGGGTGCTACGAACAATTAGTGATCGGATA
TACTGTAAACATAAAAAAAGGGGAGGACGAAGATTTGACGCTGACATACGAAACAAGCTT
CACAGATCATGCACAAACAGGTTGCATTAAATGTTTGACATCTGGGAAATCGTATGTTGC
AGCTGGTTCCACTGACGAAACGATTTGTTTGTACGATTTAAACGAAGGGAAAGAGCTTTG
GATTCTTACAGGACCAGTTAATCAAGTTATTTTCCCGGATAAGCAGCGTCTTATAAGTTG
CAGTGATGATGGAACAATATCTGTTTGGGAGGCTCAACCATCAGGAAACATGATAAAGTC
ATTAAAAGGCATGTTTACTGTTCACCCATCCGGGAAACTTGGGATGTCAGTTTCGCCCAA
AGATGGGACACTAAGGACATGGAATTTACTCACAAGCAGATCTGTGTATGTTAAAAATAT
AAAGAAAGAAAGCCAAATTGAATTTATAAGGTGGTCTCCGGATGGAAAATATTACATTTC
TGCTTCTCCTAAACAGCTGAATATATTTGAACTTGAGAATGCCGAATGTGTGTGTGAATG
TGACTTTGATATCCCAGTTCTTACCATTGAGTTTCTACCACTTAATCAAACTCAAATGAA
TCGAATTGTGGTGGGCGATAATGGTGGAAATATATCACTTTACGAAATACCATCTGGAAA
AAAGCTTTTAAGCTACAAGGCACATGAGAACAGAGTCAAATGCGTTAGCCCAATGGTCAC
CCCAGAAGACATTATACTTAATGGAACATGGCTAGTGACAGCTTCTTCCGATGAATGTGT
TAAAGTATGGGATGTTTCAAACTCTGAACTTGATCAAGAAAAAACACCAAACTGCTTGCT
GACCATACCCACAGGAGCTAGACTGACCTGCGTTACAGTGTGGCCGAAAACTGAACCAAG
ACTTCCTGCGTCAACTGAAAGTTTAGACACAAGTGAATCAGCTACAGAAAAGAAAACAGC
AAAAAGAAGAAGAAAGCGAAAAAATTCGGCAAAGCGGAATCCAAGCTGATATTGAAGCAA
GTTGTGGCAATGTGTTTGTCAATAAATCTGTGTTTATATA
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[8-208] 5.9E-26 - T[209-353] 4.1E-13 |
| SMART |
WD40_repeat (IPR001680) - T[33-72] 0.68 - T[75-110] 0.027 - T[114-148] 320.0 - T[153-190] 20.0 - T[193-235] 80.0 - T[238-284] 0.01 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[33-287] 6.11E-40 |
| PRINTS |
G-protein_beta_WD-40_rep (IPR020472) - T[59-73] 3.6E-5 - T[97-111] 3.6E-5 - T[271-285] 3.6E-5 |
| Pfam |
WD40_repeat (IPR001680) - T[77-109] 0.001 - T[239-284] 4.6E-4 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[92-110] 8.503 - T[267-293] 9.84 |
| ProSitePatterns |
WD40_repeat_CS (IPR019775) - T[97-111] . - T[271-285] . |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[141-293] 10.733 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PK1IP_HUMAN | 32.162 % | 169 | 5.58E-49 |