- Transcript 'Mooccu.CG.ELv1_2.S47...' >
- Transcript 'KH2012:KH.L153.79.v1...' >
- Transcript 'KH2012:KH.C9.220.v2....' >
- Transcript 'Phmamm.CG.MTP2014.S1...' >
- Transcript 'KH2012:KH.C9.220.v2....'
Transcript Model
Transcript Id
KH2012:KH.C9.220.v2.A.SL16-1
Possible name(s)
PAK1IP1; WDR5; WDR5B
Gene model
Location
KhC9 [5,133,048 / 5,135,343]
Amino acid sequence
Length: 356
>KH.C9.220.v2.A.SL16-1
RLVETMFKIVVGCYEQLVIGYTVNIKKGEDEDLTLTYETSFTDHAQTGCIKCLTSGKSYV
AAGSTDETICLYDLNEGKELWILTGPVNQVIFPDKQRLISCSDDGTISVWEAQPSGNMIK
SLKGMFTVHPSGKLGMSVSPKDGTLRTWNLLTSRSVYVKNIKKESQIEFIRWSPDGKYYI
SASPKQLNIFELENAECVCECDFDIPVLTIEFLPLNQTQMNRIVVGDNGGNISLYEIPSG
KKLLSYKAHENRVKCVSPMVTPEDIILNGTWLVTASSDECVKVWDVSNSELDQEKTPNCL
LTIPTGARLTCVTVWPKTEPRLPASTESLDTSESATEKKTAKRRRKRKNSAKRNPS
Nucleotide sequence
Length: 1,124
>KH2012:KH.C9.220.v2.A.SL16-1
AAAGGTTGGTGGAAACAATGTTTAAAATCGTTGTCGGGTGCTACGAACAATTAGTGATCG
GATATACTGTAAACATAAAAAAAGGGGAGGACGAAGATTTGACGCTGACATACGAAACAA
GCTTCACAGATCATGCACAAACAGGTTGCATTAAATGTTTGACATCTGGGAAATCGTATG
TTGCAGCTGGTTCCACTGACGAAACGATTTGTTTGTACGATTTAAACGAAGGGAAAGAGC
TTTGGATTCTTACAGGACCAGTTAATCAAGTTATTTTCCCGGATAAGCAGCGTCTTATAA
GTTGCAGTGATGATGGAACAATATCTGTTTGGGAGGCTCAACCATCAGGAAACATGATAA
AGTCATTAAAAGGCATGTTTACTGTTCACCCATCCGGGAAACTTGGGATGTCAGTTTCGC
CCAAAGATGGGACACTAAGGACATGGAATTTACTCACAAGCAGATCTGTGTATGTTAAAA
ATATAAAGAAAGAAAGCCAAATTGAATTTATAAGGTGGTCTCCGGATGGAAAATATTACA
TTTCTGCTTCTCCTAAACAGCTGAATATATTTGAACTTGAGAATGCCGAATGTGTGTGTG
AATGTGACTTTGATATCCCAGTTCTTACCATTGAGTTTCTACCACTTAATCAAACTCAAA
TGAATCGAATTGTGGTGGGCGATAATGGTGGAAATATATCACTTTACGAAATACCATCTG
GAAAAAAGCTTTTAAGCTACAAGGCACATGAGAACAGAGTCAAATGCGTTAGCCCAATGG
TCACCCCAGAAGACATTATACTTAATGGAACATGGCTAGTGACAGCTTCTTCCGATGAAT
GTGTTAAAGTATGGGATGTTTCAAACTCTGAACTTGATCAAGAAAAAACACCAAACTGCT
TGCTGACCATACCCACAGGAGCTAGACTGACCTGCGTTACAGTGTGGCCGAAAACTGAAC
CAAGACTTCCTGCGTCAACTGAAAGTTTAGACACAAGTGAATCAGCTACAGAAAAGAAAA
CAGCAAAAAGAAGAAGAAAGCGAAAAAATTCGGCAAAGCGGAATCCAAGCTGATATTGAA
GCAAGTTGTGGCAATGTGTTTGTCAATAAATCTGTGTTTATATA
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[8-208] 5.8E-26 - T[209-354] 4.2E-13 |
| SMART |
WD40_repeat (IPR001680) - T[34-73] 0.68 - T[76-111] 0.027 - T[115-149] 320.0 - T[154-191] 20.0 - T[194-236] 80.0 - T[239-285] 0.01 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[34-288] 6.11E-40 |
| PRINTS |
G-protein_beta_WD-40_rep (IPR020472) - T[60-74] 3.6E-5 - T[98-112] 3.6E-5 - T[272-286] 3.6E-5 |
| Pfam |
WD40_repeat (IPR001680) - T[78-110] 0.001 - T[240-285] 4.6E-4 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[93-111] 8.503 - T[268-294] 9.84 |
| ProSitePatterns |
WD40_repeat_CS (IPR019775) - T[98-112] . - T[272-286] . |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[142-294] 10.733 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PK1IP_HUMAN | 32.162 % | 169 | 5.79E-49 |