- Transcript 'KH2012:KH.C9.64.v1.A...' >
- Transcript 'KH2012:KH.C9.220.v2....'
Transcript Model
Transcript Id
KH2012:KH.C9.220.v2.A.nonSL17-1
Possible name(s)
PAK1IP1; WDR5; WDR5B
Gene model
Location
KhC9 [5,133,044 / 5,135,343]
Amino acid sequence
Length: 358
>KH.C9.220.v2.A.nonSL17-1
LERLVETMFKIVVGCYEQLVIGYTVNIKKGEDEDLTLTYETSFTDHAQTGCIKCLTSGKS
YVAAGSTDETICLYDLNEGKELWILTGPVNQVIFPDKQRLISCSDDGTISVWEAQPSGNM
IKSLKGMFTVHPSGKLGMSVSPKDGTLRTWNLLTSRSVYVKNIKKESQIEFIRWSPDGKY
YISASPKQLNIFELENAECVCECDFDIPVLTIEFLPLNQTQMNRIVVGDNGGNISLYEIP
SGKKLLSYKAHENRVKCVSPMVTPEDIILNGTWLVTASSDECVKVWDVSNSELDQEKTPN
CLLTIPTGARLTCVTVWPKTEPRLPASTESLDTSESATEKKTAKRRRKRKNSAKRNPS
Nucleotide sequence
Length: 1,128
>KH2012:KH.C9.220.v2.A.nonSL17-1
TTAGAAAGGTTGGTGGAAACAATGTTTAAAATCGTTGTCGGGTGCTACGAACAATTAGTG
ATCGGATATACTGTAAACATAAAAAAAGGGGAGGACGAAGATTTGACGCTGACATACGAA
ACAAGCTTCACAGATCATGCACAAACAGGTTGCATTAAATGTTTGACATCTGGGAAATCG
TATGTTGCAGCTGGTTCCACTGACGAAACGATTTGTTTGTACGATTTAAACGAAGGGAAA
GAGCTTTGGATTCTTACAGGACCAGTTAATCAAGTTATTTTCCCGGATAAGCAGCGTCTT
ATAAGTTGCAGTGATGATGGAACAATATCTGTTTGGGAGGCTCAACCATCAGGAAACATG
ATAAAGTCATTAAAAGGCATGTTTACTGTTCACCCATCCGGGAAACTTGGGATGTCAGTT
TCGCCCAAAGATGGGACACTAAGGACATGGAATTTACTCACAAGCAGATCTGTGTATGTT
AAAAATATAAAGAAAGAAAGCCAAATTGAATTTATAAGGTGGTCTCCGGATGGAAAATAT
TACATTTCTGCTTCTCCTAAACAGCTGAATATATTTGAACTTGAGAATGCCGAATGTGTG
TGTGAATGTGACTTTGATATCCCAGTTCTTACCATTGAGTTTCTACCACTTAATCAAACT
CAAATGAATCGAATTGTGGTGGGCGATAATGGTGGAAATATATCACTTTACGAAATACCA
TCTGGAAAAAAGCTTTTAAGCTACAAGGCACATGAGAACAGAGTCAAATGCGTTAGCCCA
ATGGTCACCCCAGAAGACATTATACTTAATGGAACATGGCTAGTGACAGCTTCTTCCGAT
GAATGTGTTAAAGTATGGGATGTTTCAAACTCTGAACTTGATCAAGAAAAAACACCAAAC
TGCTTGCTGACCATACCCACAGGAGCTAGACTGACCTGCGTTACAGTGTGGCCGAAAACT
GAACCAAGACTTCCTGCGTCAACTGAAAGTTTAGACACAAGTGAATCAGCTACAGAAAAG
AAAACAGCAAAAAGAAGAAGAAAGCGAAAAAATTCGGCAAAGCGGAATCCAAGCTGATAT
TGAAGCAAGTTGTGGCAATGTGTTTGTCAATAAATCTGTGTTTATATA
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[10-210] 5.9E-26 - T[211-356] 4.2E-13 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[13-289] 1.07E-39 |
| SMART |
WD40_repeat (IPR001680) - T[36-75] 0.68 - T[78-113] 0.027 - T[117-151] 320.0 - T[156-193] 20.0 - T[196-238] 80.0 - T[241-287] 0.01 |
| PRINTS |
G-protein_beta_WD-40_rep (IPR020472) - T[62-76] 3.7E-5 - T[100-114] 3.7E-5 - T[274-288] 3.7E-5 |
| Pfam |
WD40_repeat (IPR001680) - T[80-112] 0.001 - T[242-287] 4.6E-4 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[95-113] 8.503 - T[270-296] 9.84 |
| ProSitePatterns |
WD40_repeat_CS (IPR019775) - T[100-114] . - T[274-288] . |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[144-296] 10.733 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PK1IP_HUMAN | 32.075 % | 169 | 6.37E-49 |