- Transcript 'Harore.CG.MTP2014.S1...' >
- Transcript 'KH2012:KH.C9.220.v2....'
Transcript Model
Transcript Id
KH2012:KH.C9.220.v2.A.nonSL15-1
Possible name(s)
PAK1IP1; WDR5; WDR5B
Gene model
Location
KhC9 [5,133,035 / 5,135,343]
Amino acid sequence
Length: 361
>KH.C9.220.v2.A.nonSL15-1
YEYLERLVETMFKIVVGCYEQLVIGYTVNIKKGEDEDLTLTYETSFTDHAQTGCIKCLTS
GKSYVAAGSTDETICLYDLNEGKELWILTGPVNQVIFPDKQRLISCSDDGTISVWEAQPS
GNMIKSLKGMFTVHPSGKLGMSVSPKDGTLRTWNLLTSRSVYVKNIKKESQIEFIRWSPD
GKYYISASPKQLNIFELENAECVCECDFDIPVLTIEFLPLNQTQMNRIVVGDNGGNISLY
EIPSGKKLLSYKAHENRVKCVSPMVTPEDIILNGTWLVTASSDECVKVWDVSNSELDQEK
TPNCLLTIPTGARLTCVTVWPKTEPRLPASTESLDTSESATEKKTAKRRRKRKNSAKRNP
S
Nucleotide sequence
Length: 1,137
>KH2012:KH.C9.220.v2.A.nonSL15-1
TACGAATACTTAGAAAGGTTGGTGGAAACAATGTTTAAAATCGTTGTCGGGTGCTACGAA
CAATTAGTGATCGGATATACTGTAAACATAAAAAAAGGGGAGGACGAAGATTTGACGCTG
ACATACGAAACAAGCTTCACAGATCATGCACAAACAGGTTGCATTAAATGTTTGACATCT
GGGAAATCGTATGTTGCAGCTGGTTCCACTGACGAAACGATTTGTTTGTACGATTTAAAC
GAAGGGAAAGAGCTTTGGATTCTTACAGGACCAGTTAATCAAGTTATTTTCCCGGATAAG
CAGCGTCTTATAAGTTGCAGTGATGATGGAACAATATCTGTTTGGGAGGCTCAACCATCA
GGAAACATGATAAAGTCATTAAAAGGCATGTTTACTGTTCACCCATCCGGGAAACTTGGG
ATGTCAGTTTCGCCCAAAGATGGGACACTAAGGACATGGAATTTACTCACAAGCAGATCT
GTGTATGTTAAAAATATAAAGAAAGAAAGCCAAATTGAATTTATAAGGTGGTCTCCGGAT
GGAAAATATTACATTTCTGCTTCTCCTAAACAGCTGAATATATTTGAACTTGAGAATGCC
GAATGTGTGTGTGAATGTGACTTTGATATCCCAGTTCTTACCATTGAGTTTCTACCACTT
AATCAAACTCAAATGAATCGAATTGTGGTGGGCGATAATGGTGGAAATATATCACTTTAC
GAAATACCATCTGGAAAAAAGCTTTTAAGCTACAAGGCACATGAGAACAGAGTCAAATGC
GTTAGCCCAATGGTCACCCCAGAAGACATTATACTTAATGGAACATGGCTAGTGACAGCT
TCTTCCGATGAATGTGTTAAAGTATGGGATGTTTCAAACTCTGAACTTGATCAAGAAAAA
ACACCAAACTGCTTGCTGACCATACCCACAGGAGCTAGACTGACCTGCGTTACAGTGTGG
CCGAAAACTGAACCAAGACTTCCTGCGTCAACTGAAAGTTTAGACACAAGTGAATCAGCT
ACAGAAAAGAAAACAGCAAAAAGAAGAAGAAAGCGAAAAAATTCGGCAAAGCGGAATCCA
AGCTGATATTGAAGCAAGTTGTGGCAATGTGTTTGTCAATAAATCTGTGTTTATATA
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[13-213] 6.0E-26 - T[214-359] 4.3E-13 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[16-292] 1.19E-39 |
| SMART |
WD40_repeat (IPR001680) - T[39-78] 0.68 - T[81-116] 0.027 - T[120-154] 320.0 - T[159-196] 20.0 - T[199-241] 80.0 - T[244-290] 0.01 |
| PRINTS |
G-protein_beta_WD-40_rep (IPR020472) - T[65-79] 3.8E-5 - T[103-117] 3.8E-5 - T[277-291] 3.8E-5 |
| Pfam |
WD40_repeat (IPR001680) - T[83-115] 0.0011 - T[245-290] 4.7E-4 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[98-116] 8.503 - T[273-299] 9.84 |
| ProSitePatterns |
WD40_repeat_CS (IPR019775) - T[103-117] . - T[277-291] . |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[147-299] 10.733 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PK1IP_HUMAN | 32.075 % | 168 | 7.51E-49 |