- Region 'REG00000863' >
- Transcript 'Harore.CG.MTP2014.S2...' >
- Transcript 'KH2012:KH.C9.220.v1....'
Transcript Model
Transcript Id
KH2012:KH.C9.220.v1.A.SL6-1
Possible name(s)
PAK1IP1; WDR5; WDR5B
Gene model
Location
KhC9 [5,133,052 / 5,135,343]
Amino acid sequence
Length: 233
>KH.C9.220.v1.A.SL6-1
TSLAVHPSGKLGMSVSPKDGTLRTWNLLTSRSVYVKNIKKESQIEFIRWSPDGKYYISAS
PKQLNIFELENAECVCECDFDIPVLTIEFLPLNQTQMNRIVVGDNGGNISLYEIPSGKKL
LSYKAHENRVKCVSPMVTPEDIILNGTWLVTASSDECVKVWDVSNSELDQEKTPNCLLTI
PTGARLTCVTVWPKTEPRLPASTESLDTSESATEKKTAKRRRKRKNSAKRNPS
Nucleotide sequence
Length: 1,150
>KH2012:KH.C9.220.v1.A.SL6-1
GTTGGTGGAAACAATGTTTAAAATCGTTGTCGGGTGCTACGAACAATTAGTGATCGGATA
TACTGTAAACATAAAAAAAGGGGAGGACGAAGATTTGACGCTGACATACGAAACAAGCTT
CACAGATCATGCACAAACAGGTTGCATTAAATGTTTGACATCTGGGAAATCGTATGTTGC
AGCTGGTTCCACTGACGAAACGATTTGTTTGTACGATTTAAACGAAGGGAAAGAGCTTTG
GATTCTTACAGGGTCATGAAGGACCAGTTAATCAAGTTATTTTCCCGGATAAGCAGCGTC
TTATAAGTTGCAGTGATGATGGAACAATATCTGTTTGGGAGGCTCAACCATCAGGAAACA
TGATAAAGTCATTAAAAGGTCATAAAGGCCCAGTTAAACGTCACTAGCTGTTCACCCATC
CGGGAAACTTGGGATGTCAGTTTCGCCCAAAGATGGGACACTAAGGACATGGAATTTACT
CACAAGCAGATCTGTGTATGTTAAAAATATAAAGAAAGAAAGCCAAATTGAATTTATAAG
GTGGTCTCCGGATGGAAAATATTACATTTCTGCTTCTCCTAAACAGCTGAATATATTTGA
ACTTGAGAATGCCGAATGTGTGTGTGAATGTGACTTTGATATCCCAGTTCTTACCATTGA
GTTTCTACCACTTAATCAAACTCAAATGAATCGAATTGTGGTGGGCGATAATGGTGGAAA
TATATCACTTTACGAAATACCATCTGGAAAAAAGCTTTTAAGCTACAAGGCACATGAGAA
CAGAGTCAAATGCGTTAGCCCAATGGTCACCCCAGAAGACATTATACTTAATGGAACATG
GCTAGTGACAGCTTCTTCCGATGAATGTGTTAAAGTATGGGATGTTTCAAACTCTGAACT
TGATCAAGAAAAAACACCAAACTGCTTGCTGACCATACCCACAGGAGCTAGACTGACCTG
CGTTACAGTGTGGCCGAAAACTGAACCAAGACTTCCTGCGTCAACTGAAAGTTTAGACAC
AAGTGAATCAGCTACAGAAAAGAAAACAGCAAAAAGAAGAAGAAAGCGAAAAAATTCGGC
AAAGCGGAATCCAAGCTGATATTGAAGCAAGTTGTGGCAATGTGTTTGTCAATAAATCTG
TGTTTATATA
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[1-223] 2.0E-26 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[1-171] 12.42 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[2-193] 1.25E-26 |
| SMART |
WD40_repeat (IPR001680) - T[31-68] 20.0 - T[71-113] 80.0 - T[116-162] 0.01 |
| Pfam |
WD40_repeat (IPR001680) - T[117-162] 2.4E-4 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[145-171] 9.84 |
| ProSitePatterns |
WD40_repeat_CS (IPR019775) - T[149-163] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PK1IP_HUMAN | 36.458 % | 111 | 7.27E-29 |