- Transcript 'KH2012:KH.C9.220.v1....'
Transcript Model
Transcript Id
KH2012:KH.C9.220.v1.A.nonSL9-1
Possible name(s)
PAK1IP1; WDR5; WDR5B
Gene model
Location
KhC9 [5,133,015 / 5,135,343]
Amino acid sequence
Length: 233
>KH.C9.220.v1.A.nonSL9-1
TSLAVHPSGKLGMSVSPKDGTLRTWNLLTSRSVYVKNIKKESQIEFIRWSPDGKYYISAS
PKQLNIFELENAECVCECDFDIPVLTIEFLPLNQTQMNRIVVGDNGGNISLYEIPSGKKL
LSYKAHENRVKCVSPMVTPEDIILNGTWLVTASSDECVKVWDVSNSELDQEKTPNCLLTI
PTGARLTCVTVWPKTEPRLPASTESLDTSESATEKKTAKRRRKRKNSAKRNPS
Nucleotide sequence
Length: 1,187
>KH2012:KH.C9.220.v1.A.nonSL9-1
GTTAGATCTAATAAGCGTGATACGAATACTTAGAAAGGTTGGTGGAAACAATGTTTAAAA
TCGTTGTCGGGTGCTACGAACAATTAGTGATCGGATATACTGTAAACATAAAAAAAGGGG
AGGACGAAGATTTGACGCTGACATACGAAACAAGCTTCACAGATCATGCACAAACAGGTT
GCATTAAATGTTTGACATCTGGGAAATCGTATGTTGCAGCTGGTTCCACTGACGAAACGA
TTTGTTTGTACGATTTAAACGAAGGGAAAGAGCTTTGGATTCTTACAGGGTCATGAAGGA
CCAGTTAATCAAGTTATTTTCCCGGATAAGCAGCGTCTTATAAGTTGCAGTGATGATGGA
ACAATATCTGTTTGGGAGGCTCAACCATCAGGAAACATGATAAAGTCATTAAAAGGTCAT
AAAGGCCCAGTTAAACGTCACTAGCTGTTCACCCATCCGGGAAACTTGGGATGTCAGTTT
CGCCCAAAGATGGGACACTAAGGACATGGAATTTACTCACAAGCAGATCTGTGTATGTTA
AAAATATAAAGAAAGAAAGCCAAATTGAATTTATAAGGTGGTCTCCGGATGGAAAATATT
ACATTTCTGCTTCTCCTAAACAGCTGAATATATTTGAACTTGAGAATGCCGAATGTGTGT
GTGAATGTGACTTTGATATCCCAGTTCTTACCATTGAGTTTCTACCACTTAATCAAACTC
AAATGAATCGAATTGTGGTGGGCGATAATGGTGGAAATATATCACTTTACGAAATACCAT
CTGGAAAAAAGCTTTTAAGCTACAAGGCACATGAGAACAGAGTCAAATGCGTTAGCCCAA
TGGTCACCCCAGAAGACATTATACTTAATGGAACATGGCTAGTGACAGCTTCTTCCGATG
AATGTGTTAAAGTATGGGATGTTTCAAACTCTGAACTTGATCAAGAAAAAACACCAAACT
GCTTGCTGACCATACCCACAGGAGCTAGACTGACCTGCGTTACAGTGTGGCCGAAAACTG
AACCAAGACTTCCTGCGTCAACTGAAAGTTTAGACACAAGTGAATCAGCTACAGAAAAGA
AAACAGCAAAAAGAAGAAGAAAGCGAAAAAATTCGGCAAAGCGGAATCCAAGCTGATATT
GAAGCAAGTTGTGGCAATGTGTTTGTCAATAAATCTGTGTTTATATA
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[1-223] 2.0E-26 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[1-171] 12.42 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[2-193] 1.25E-26 |
| SMART |
WD40_repeat (IPR001680) - T[31-68] 20.0 - T[71-113] 80.0 - T[116-162] 0.01 |
| Pfam |
WD40_repeat (IPR001680) - T[117-162] 2.4E-4 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[145-171] 9.84 |
| ProSitePatterns |
WD40_repeat_CS (IPR019775) - T[149-163] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PK1IP_HUMAN | 36.458 % | 111 | 7.27E-29 |