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  1. Transcript 'KH2012:KH.C12.58.v1....' > 
  2. Transcript 'KH2012:KH.C9.167.v1....'

Transcript Model

Transcript Id

KH2012:KH.C9.167.v1.B.ND1-1

Possible name(s)

GP1BA; LRG1; LRRC15

Gene model

KH2012:KH.C9.167

Location

KhC9 [2,064,704 / 2,070,010]

Sequences

Amino acid sequence

Length: 433

>KH.C9.167.v1.B.ND1-1
DQKYYRVWVEYGYSNINGVCWYVEMRYLSSQVFLGLVLEFLISYTPSASRIKHCSNKTNG
QNCKFDHRHNILWCDSTTFTSLPPPNEIHGEGDPRYAETIYLNSSCQQNFRGVLRQYAHV
KQLNYDDNMIQTIPKSCFSHLHLDELILSRNSISTINSAFNGVSNLTILRLDRNNLKYVH
RHAFKELISMKLLDLSYNKIKKFEPGHLSGLVQLRELRLKHNHLQSLDSDLLVSSPHLEV
VDLSFNRLQCLPANLFDNQSDLKSVLLMSNQLRTPHSDWFRRIVANGRVPDVNLMQNNKW
LCDCHSIKYRDFLKDKDQWIDKLDVRCFQPATNKGKYLSDVKHFGSCLYPLESLECEQQQ
SSTRTTNDVCVIPQRNNIQRSKCDSGFVAWDEDSLVPQQFWSNTPGNMIRETQDQRSILS
GDDHNVYEDVSYV

Nucleotide sequence

Length: 1,740

>KH2012:KH.C9.167.v1.B.ND1-1
TTAGGTTAAGATTTTTATAAGATCAAAAGTATTATAGAGTATGGGTTGAGTATGGGTACT
CTAACATAAATGGTGTCTGTTGGTATGTAGAAATGCGTTATTTATCTTCACAAGTCTTTC
TTGGTCTTGTTTTAGAGTTCCTTATTTCTTATACACCTTCAGCATCTCGTATAAAACACT
GTTCCAACAAAACCAATGGACAAAATTGCAAGTTTGACCACAGGCATAATATACTATGGT
GTGATTCCACAACTTTTACTTCATTACCTCCACCCAATGAAATACATGGAGAAGGTGATC
CTCGGTATGCTGAAACAATTTACTTAAACTCAAGTTGCCAACAGAATTTTAGAGGTGTTC
TGCGGCAATACGCCCATGTAAAGCAACTGAACTATGACGACAACATGATACAAACTATTC
CCAAGTCATGCTTCAGTCATTTACATCTAGATGAACTTATATTGTCACGGAATTCAATTT
CAACCATTAATAGTGCTTTTAATGGTGTATCAAATTTGACAATTTTACGATTGGATCGGA
ACAACTTAAAGTATGTGCACAGACATGCTTTCAAAGAATTAATATCAATGAAACTACTTG
ATCTTAGCTACAATAAAATAAAAAAGTTTGAACCAGGACATCTGAGTGGCCTGGTACAGT
TAAGGGAATTGCGGTTGAAGCATAATCACTTACAAAGCCTTGATAGCGACTTGTTGGTGT
CATCTCCACATTTGGAAGTTGTTGACCTTAGTTTTAACAGACTTCAATGTTTACCTGCCA
ACCTGTTTGATAACCAAAGTGACCTGAAATCAGTTCTACTCATGTCAAACCAACTTCGTA
CTCCACATTCAGATTGGTTTCGACGTATCGTTGCAAATGGGAGGGTACCGGATGTAAATT
TAATGCAAAACAACAAATGGTTATGTGATTGCCATTCAATTAAATACAGAGATTTTCTTA
AAGACAAAGATCAATGGATTGATAAATTGGATGTTAGGTGCTTTCAACCTGCAACGAATA
AAGGAAAGTATCTAAGTGATGTAAAACACTTTGGAAGCTGTCTTTATCCATTAGAATCAT
TGGAATGTGAACAGCAACAGTCTTCTACAAGAACAACAAATGATGTATGTGTAATACCAC
AACGCAACAACATACAACGAAGTAAATGCGACAGTGGTTTTGTGGCGTGGGACGAAGACA
GCTTAGTTCCACAGCAGTTTTGGAGTAACACACCAGGAAATATGATACGTGAAACACAGG
ATCAAAGAAGCATTTTAAGTGGTGACGACCACAACGTTTATGAGGATGTCTCCTATGTAT
AAGCCAACCGAATTACAGACAATGTGTAAAAGTCGAATATGCAAATCGTGACAATATTTA
CACTTTACCGTTATCGTAATTTTATTGGTTTACTATGCACATAACATTTAAATTTGCCTT
AATTTGAAGACCGAAGCACTTATTTAAACATCATTTTATGAAATGTATAATTAGCTTGTG
GCAAATTTACGAATTTACGAATTCGTTCCTGCTGACATAAGTGTCACTGAAGCGTGTTGC
TCACATTTGAACTCGTGGGTTTTTTATAAGCTTGCTTTTATCGCTGTACATTCCATGCTT
TAACTGTGCCTTTTGATCAATTATGTGCTACTCAGTGTTTGGAGTAGTTAGGCCTATAGT
GTATTAAAAATATGCTTTATAACAAAGTTATATGCAATACACATCCAAACGTCTATTAAA

InterProScan

Gene3D
LRR_dom_sf (IPR032675) - T[53-216] 1.7E-24 - T[217-363] 1.0E-21
SMART
Leu-rich_rpt_typical-subtyp (IPR003591) - T[142-162] 150.0 - T[163-186] 1.1 - T[187-210] 25.0 - T[211-234] 0.4 - T[236-258] 0.35
Pfam
Leu-rich_rpt (IPR001611) - T[164-224] 1.4E-16

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
LRC15_HUMAN 31.169 % 91.7 8.68E-20
GPV_HUMAN 28.346 % 80.9 2.32E-16
GP1BA_HUMAN 26.154 % 85.9 6.19E-18