- Transcript 'KH2012:KH.C1.1040.v1...' >
- Transcript 'KH2012:KH.C9.133.v4....'
Transcript Model
Transcript Id
KH2012:KH.C9.133.v4.A.SL2-1
Possible name(s)
UNC5B; UNC5C; UNC5D
Gene model
Location
KhC9 [5,057,607 / 5,066,709]
Amino acid sequence
Length: 558
>KH.C9.133.v4.A.SL2-1
DLEIRGLLKDISEPNLQTSAAQQSLKESEQTVVERNPASVTLTTEREHAPTMVDEYEPTL
PLFLVEPTDQYVVRSTPARITCQVTSANEALIKCNNRWLSSPTSRTSQTEDPETGKTITT
ISIEVTRNTLDSFFAPYTYWCQCVAWSGAGEVKSRRALVKLAFLRRNFEQEPMADRVAVG
DEYKLQCKPPAGQPKPIVEWLKNDQPLTSSKNSNFLVTEDGDLIIQTRNVEDSGNYTCVA
KNIASKRRSHTATLTVGVKGGWSNWSPWTGCTEKCGIGVQRRIRRCNNPAPQNGGANCAG
ETTQTMTCHKQCPVDGRWTDWSMWSTCSPECLHRRRRTCTRPTPQNSGRVCPGADIETKN
CTDGLCTAIRGQTESTENQNLILYSCLFVALGLLLMIVIATLVILKRKRTTVSRSSSYTG
GRPMGPYSTAPRNGGIHDDFCIIPTKPPVVGDAPPFAFQQQYPSLRDHSYQPCGRTPKQC
ESDKYQKYGYSNDEKNYHIILCSRDEHSVCYHGSSMQRGKHAYQAKTLSHGNSPTKEKCG
TIDGAPPNGFIKLRRNRH
Nucleotide sequence
Length: 2,243
>KH2012:KH.C9.133.v4.A.SL2-1
ACGACTTGGAAATTAGGGGTCTGTTAAAAGACATTTCGGAGCCGAACTTACAAACTAGCG
CAGCTCAACAAAGTTTAAAGGAGTCGGAGCAGACGGTGGTTGAACGAAATCCCGCTTCGG
TTACATTAACAACAGAAAGAGAACACGCCCCAACCATGGTTGACGAATACGAGCCGACGT
TACCGCTGTTTCTTGTCGAACCGACCGATCAATACGTGGTAAGGTCCACACCAGCTAGGA
TCACGTGCCAAGTGACGTCAGCGAACGAAGCTCTTATTAAATGCAACAACAGGTGGTTGA
GCAGTCCTACCTCACGCACAAGTCAAACCGAAGACCCAGAAACGGGTAAAACAATCACAA
CTATTTCGATCGAGGTTACGAGGAACACACTCGATTCGTTCTTTGCCCCTTACACATATT
GGTGTCAATGCGTTGCGTGGAGTGGGGCGGGGGAAGTCAAAAGTAGGCGGGCGTTGGTTA
AACTTGCATTTTTACGACGGAATTTTGAGCAAGAACCGATGGCTGACCGAGTGGCAGTCG
GGGACGAATACAAACTTCAATGTAAACCCCCAGCTGGACAACCCAAGCCTATTGTTGAGT
GGTTAAAGAACGACCAACCGTTGACGTCATCGAAAAATTCGAATTTCTTGGTCACTGAGG
ACGGAGATCTGATTATACAAACGAGGAACGTCGAAGACTCGGGCAATTATACGTGTGTTG
CAAAGAACATTGCTTCGAAACGACGAAGCCACACAGCGACATTGACCGTTGGAGTTAAGG
GAGGTTGGAGCAACTGGTCCCCATGGACTGGATGCACAGAGAAGTGTGGCATCGGTGTTC
AGAGGAGGATACGAAGATGTAACAACCCAGCTCCACAAAACGGGGGAGCTAATTGTGCGG
GAGAGACAACTCAGACTATGACGTGTCACAAGCAATGTCCAGTTGATGGTCGTTGGACAG
ACTGGTCAATGTGGTCAACTTGTAGCCCTGAATGTCTACACAGGCGACGACGAACATGTA
CACGACCAACCCCTCAAAACAGCGGGCGAGTTTGCCCGGGAGCCGATATTGAAACTAAGA
ACTGCACGGACGGCCTTTGCACCGCTATCCGAGGCCAGACGGAATCAACCGAAAATCAGA
ACCTGATCCTGTACAGCTGTTTGTTTGTTGCTCTTGGTTTGTTACTAATGATCGTCATAG
CAACTCTCGTTATTTTGAAAAGGAAACGAACCACCGTATCCAGATCATCTTCTTACACTG
GGGGTCGCCCTATGGGACCTTACTCAACAGCGCCGCGTAACGGCGGAATACACGACGATT
TCTGTATCATACCGACCAAGCCACCGGTGGTAGGGGATGCGCCACCTTTTGCGTTCCAAC
AACAATATCCCTCTCTACGTGATCATAGTTACCAACCTTGTGGTCGCACACCAAAACAAT
GCGAATCGGATAAATATCAGAAGTACGGTTACTCCAACGACGAAAAGAACTATCACATAA
TACTTTGTTCACGAGACGAACACAGTGTGTGCTACCACGGTAGCAGCATGCAACGAGGAA
AACACGCTTACCAAGCGAAGACTCTATCTCACGGAAATTCGCCAACTAAAGAAAAATGCG
GGACCATCGACGGGGCACCACCCAACGGCTTTATTAAGCTACGACGGAACCGTCACTAGT
GGGCGGTCTGGCTCGCTAAGTCACAAGCATGTCACTTTTGCCGATGGAAAAATGATCGTC
GCGTCAGAATACGACTCTGGTTTCGAAGGCGAATCCATTCACGCAAATAGTGTGGTCAAC
GGCCATGCGAATGATATTCAACGTGAAGGTAGCGAATACTCGGACGCAGGTTATAGCGTT
TCCAGCTCTAGTGCTGTCGGGGAAATGGATGCCAACTTTACCGGCATTCTGAAAGAGCAA
TCGCAACAAGATACTGAAATGTACCAACACACGTAACGGAGCTGTTGTGCTTTTACTTTC
AATACGTCGGGGTCCCAGGATGGAATGCTTTACATACGGGGGAGGGTTTGACCATATTAT
AAGCAATTCAGTGTTACAGTACGGAAGAAGCAGCGCTATTTACATTCAGTATCCGGATGC
GTTACTGACCAAACTGAAGCTGCTACGAATGCAGTCTTGTTCTTTTGTTTTTTTGTGCAG
TTATATAAAGTCGCATGTGCTTTTACTGTTCGAACTTTTACTTTTTTCTATGCATCGGCA
AATAAACAAACAACATAATATAA
| Gene3D |
Ig-like_fold (IPR013783) - T[58-166] 1.8E-29 - T[167-260] 3.7E-21 |
| PANTHER |
UNC5 (IPR037936) - T[59-410] 5.3E-122 |
| Pfam |
Ig_I-set (IPR013098) - T[167-256] 9.3E-17 |
| SUPERFAMILY |
Ig-like_dom_sf (IPR036179) - T[170-259] 7.76E-19 |
| SMART |
Ig_sub (IPR003599) - T[172-257] 2.0E-5 |
| SMART |
Ig_sub2 (IPR003598) - T[178-245] 2.8E-7 |
| ProSiteProfiles |
Ig-like_dom (IPR007110) - T[180-255] 11.896 |
| SUPERFAMILY |
TSP1_rpt_sf (IPR036383) - T[258-309] 1.7E-14 - T[312-366] 1.23E-9 |
| ProSiteProfiles |
TSP1_rpt (IPR000884) - T[259-313] 13.284 - T[315-367] 11.045 |
| Gene3D |
TSP1_rpt_sf (IPR036383) - T[261-312] 1.3E-17 - T[313-366] 2.5E-12 |
| SMART |
TSP1_rpt (IPR000884) - T[262-313] 3.3E-12 - T[318-367] 4.4E-6 |
| Pfam |
TSP1_rpt (IPR000884) - T[263-312] 8.0E-10 - T[320-366] 0.028 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| UNC5C_HUMAN | 44.236 % | 350 | 2.92E-110 |
| UNC5B_HUMAN | 44.417 % | 342 | 6.39E-107 |
| UNC5D_HUMAN | 44.928 % | 325 | 9.1E-101 |