- Transcript 'KH2012:KH.C9.13.v2.A...'
Transcript Model
Transcript Id
KH2012:KH.C9.13.v2.A.SL4-1
Possible name(s)
TSFM
Gene model
Location
KhC9 [3,515,555 / 3,520,894]
Amino acid sequence
Length: 333
>KH.C9.13.v2.A.SL4-1
NMLRFSVLLRRSNLSGCRLWFSTGEPNKEVNTKQVLMELRRKTGYPLITCRQALQASGYN
VEKAKEHLLQLAKEKGWNTMQMDGGVLKEGLISVVTNKNNGLIVEVNCQTDFVAKTKEFQ
SLVKDAAQTLLDVYSTQQPSKIDLNPPELLKLVVSGKKQTIEDTVAITIGKLKEKIEIRR
ASLLSVPTNSILAVYIHPSVLISKTRPGSTLGSYGAMVSLSPTDESIFLNTGKSSIKMAG
RDIAQHIVGMNPSCIGTCLKPTPNKSVTDSTPDDDVINPPEMLSPDESSHELLKQPFLLD
SSISVAHWLNYHQLNVNDFIRFQVGEKTKSAEK
Nucleotide sequence
Length: 1,374
>KH2012:KH.C9.13.v2.A.SL4-1
AAACATGCTTCGATTTTCTGTTCTACTGCGGAGGTCAAATTTATCTGGCTGTCGTTTATG
GTTCAGTACCGGAGAACCAAACAAAGAAGTGAATACAAAACAAGTTTTAATGGAGTTACG
GCGTAAAACAGGCTATCCGTTAATAACTTGTCGCCAAGCTCTGCAGGCGTCAGGTTATAA
CGTGGAAAAGGCAAAAGAACATTTGTTACAACTCGCAAAAGAGAAAGGTTGGAACACGAT
GCAGATGGACGGGGGGGTGCTGAAAGAAGGATTAATATCAGTTGTAACGAATAAAAATAA
TGGATTAATTGTTGAGGTGAACTGCCAAACAGATTTTGTTGCAAAAACCAAAGAATTTCA
AAGTTTAGTAAAAGATGCAGCTCAAACATTACTTGATGTTTATTCAACCCAACAACCTTC
CAAGATTGATTTGAATCCACCTGAACTTCTGAAGTTGGTGGTTTCTGGAAAGAAACAAAC
TATTGAAGATACTGTGGCTATTACTATTGGCAAACTAAAGGAGAAAATTGAAATTCGCCG
AGCTTCGTTGCTATCCGTCCCAACCAATTCCATTCTCGCTGTTTACATTCATCCGAGCGT
CCTCATCTCAAAAACTCGGCCAGGATCTACTTTAGGAAGTTATGGGGCCATGGTGTCACT
TTCACCAACTGATGAGTCAATTTTTTTGAATACTGGAAAGTCCTCCATCAAAATGGCTGG
CAGAGATATTGCGCAACATATAGTTGGAATGAACCCATCATGTATTGGAACATGCTTAAA
ACCAACCCCAAATAAAAGCGTGACGGACTCCACACCAGATGATGACGTTATTAACCCTCC
AGAAATGCTTAGTCCAGATGAATCAAGTCATGAACTACTTAAACAACCATTTCTTTTAGA
CAGTTCTATCTCAGTGGCTCATTGGTTGAATTATCACCAACTAAACGTGAACGATTTTAT
TCGTTTTCAAGTCGGAGAGAAAACGAAATCTGCCGAGAAATAATTTAAAGTTAAAAATCA
TGAAGATAGGGCTGGATACAGTTAAGTGTATGATGGAAAAATGATGTTGCTAATTTCAGC
TCATTACAGATTGGTTTCATCATTGTGTTTTTTCAACTTGATGCTTATGCTGTTAATACA
AGTTTTTTAAACATAGGCAAGCAAGTAGAAAAGTATAATTAAATTATATAACTGTAAAAG
GGCATGTATTTTAAAATATCATCATCATATAGTAGGGTGGAAAAAGATGGGACACTTTTT
CTTGTCCCATTTGGTAGTAAACAAAGTACATTCGTTATAAAACCATGTTTTTACGACTCT
AATAGACTGTTGTTAACCGTTTGCAAGAATTACAACACGATTAGGATATTTAAA
| PANTHER |
Transl_elong_EFTs/EF1B (IPR001816) - T[8-331] 3.0E-72 |
| SUPERFAMILY |
UBA-like_sf (IPR009060) - T[32-77] 3.57E-7 |
| Hamap |
Transl_elong_EFTs/EF1B (IPR001816) - T[32-333] 19.743 |
| Gene3D |
EF-Ts_dimer_sf (IPR036402) - T[88-202] 3.1E-28 - T[208-333] 1.7E-24 |
| SUPERFAMILY |
EF-Ts_dimer_sf (IPR036402) - T[88-122] 4.36E-21 - T[240-326] 4.36E-21 |
| Pfam |
Transl_elong_EFTs/EF1B_dimer (IPR014039) - T[101-255] 1.5E-23 |
| ProSitePatterns |
Transl_elong_Ts_CS (IPR018101) - T[105-115] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| EFTS_HUMAN | 31.722 % | 155 | 6.7E-45 |