- Transcript 'KH2012:KH.C9.13.v2.A...'
Transcript Model
Transcript Id
KH2012:KH.C9.13.v2.A.nonSL8-1
Possible name(s)
TSFM
Gene model
Location
KhC9 [3,515,531 / 3,520,894]
Amino acid sequence
Length: 341
>KH.C9.13.v2.A.nonSL8-1
IVVWNKTRNMLRFSVLLRRSNLSGCRLWFSTGEPNKEVNTKQVLMELRRKTGYPLITCRQ
ALQASGYNVEKAKEHLLQLAKEKGWNTMQMDGGVLKEGLISVVTNKNNGLIVEVNCQTDF
VAKTKEFQSLVKDAAQTLLDVYSTQQPSKIDLNPPELLKLVVSGKKQTIEDTVAITIGKL
KEKIEIRRASLLSVPTNSILAVYIHPSVLISKTRPGSTLGSYGAMVSLSPTDESIFLNTG
KSSIKMAGRDIAQHIVGMNPSCIGTCLKPTPNKSVTDSTPDDDVINPPEMLSPDESSHEL
LKQPFLLDSSISVAHWLNYHQLNVNDFIRFQVGEKTKSAEK
Nucleotide sequence
Length: 1,398
>KH2012:KH.C9.13.v2.A.nonSL8-1
AATCGTTGTTTGGAATAAAACAAGAAACATGCTTCGATTTTCTGTTCTACTGCGGAGGTC
AAATTTATCTGGCTGTCGTTTATGGTTCAGTACCGGAGAACCAAACAAAGAAGTGAATAC
AAAACAAGTTTTAATGGAGTTACGGCGTAAAACAGGCTATCCGTTAATAACTTGTCGCCA
AGCTCTGCAGGCGTCAGGTTATAACGTGGAAAAGGCAAAAGAACATTTGTTACAACTCGC
AAAAGAGAAAGGTTGGAACACGATGCAGATGGACGGGGGGGTGCTGAAAGAAGGATTAAT
ATCAGTTGTAACGAATAAAAATAATGGATTAATTGTTGAGGTGAACTGCCAAACAGATTT
TGTTGCAAAAACCAAAGAATTTCAAAGTTTAGTAAAAGATGCAGCTCAAACATTACTTGA
TGTTTATTCAACCCAACAACCTTCCAAGATTGATTTGAATCCACCTGAACTTCTGAAGTT
GGTGGTTTCTGGAAAGAAACAAACTATTGAAGATACTGTGGCTATTACTATTGGCAAACT
AAAGGAGAAAATTGAAATTCGCCGAGCTTCGTTGCTATCCGTCCCAACCAATTCCATTCT
CGCTGTTTACATTCATCCGAGCGTCCTCATCTCAAAAACTCGGCCAGGATCTACTTTAGG
AAGTTATGGGGCCATGGTGTCACTTTCACCAACTGATGAGTCAATTTTTTTGAATACTGG
AAAGTCCTCCATCAAAATGGCTGGCAGAGATATTGCGCAACATATAGTTGGAATGAACCC
ATCATGTATTGGAACATGCTTAAAACCAACCCCAAATAAAAGCGTGACGGACTCCACACC
AGATGATGACGTTATTAACCCTCCAGAAATGCTTAGTCCAGATGAATCAAGTCATGAACT
ACTTAAACAACCATTTCTTTTAGACAGTTCTATCTCAGTGGCTCATTGGTTGAATTATCA
CCAACTAAACGTGAACGATTTTATTCGTTTTCAAGTCGGAGAGAAAACGAAATCTGCCGA
GAAATAATTTAAAGTTAAAAATCATGAAGATAGGGCTGGATACAGTTAAGTGTATGATGG
AAAAATGATGTTGCTAATTTCAGCTCATTACAGATTGGTTTCATCATTGTGTTTTTTCAA
CTTGATGCTTATGCTGTTAATACAAGTTTTTTAAACATAGGCAAGCAAGTAGAAAAGTAT
AATTAAATTATATAACTGTAAAAGGGCATGTATTTTAAAATATCATCATCATATAGTAGG
GTGGAAAAAGATGGGACACTTTTTCTTGTCCCATTTGGTAGTAAACAAAGTACATTCGTT
ATAAAACCATGTTTTTACGACTCTAATAGACTGTTGTTAACCGTTTGCAAGAATTACAAC
ACGATTAGGATATTTAAA
| PANTHER |
Transl_elong_EFTs/EF1B (IPR001816) - T[16-339] 3.1E-72 |
| SUPERFAMILY |
UBA-like_sf (IPR009060) - T[40-85] 3.57E-7 |
| Hamap |
Transl_elong_EFTs/EF1B (IPR001816) - T[40-341] 19.743 |
| Gene3D |
EF-Ts_dimer_sf (IPR036402) - T[96-210] 3.2E-28 - T[216-341] 1.8E-24 |
| SUPERFAMILY |
EF-Ts_dimer_sf (IPR036402) - T[96-130] 4.73E-21 - T[248-334] 4.73E-21 |
| Pfam |
Transl_elong_EFTs/EF1B_dimer (IPR014039) - T[109-263] 1.6E-23 |
| ProSitePatterns |
Transl_elong_Ts_CS (IPR018101) - T[113-123] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| EFTS_HUMAN | 31.722 % | 155 | 7.78E-45 |