- Transcript 'KH2012:KH.C9.13.v2.A...'
Transcript Model
Transcript Id
KH2012:KH.C9.13.v2.A.nonSL7-1
Possible name(s)
TSFM
Gene model
Location
KhC9 [3,515,481 / 3,520,894]
Amino acid sequence
Length: 351
>KH.C9.13.v2.A.nonSL7-1
LIYWRSVIELIVVWNKTRNMLRFSVLLRRSNLSGCRLWFSTGEPNKEVNTKQVLMELRRK
TGYPLITCRQALQASGYNVEKAKEHLLQLAKEKGWNTMQMDGGVLKEGLISVVTNKNNGL
IVEVNCQTDFVAKTKEFQSLVKDAAQTLLDVYSTQQPSKIDLNPPELLKLVVSGKKQTIE
DTVAITIGKLKEKIEIRRASLLSVPTNSILAVYIHPSVLISKTRPGSTLGSYGAMVSLSP
TDESIFLNTGKSSIKMAGRDIAQHIVGMNPSCIGTCLKPTPNKSVTDSTPDDDVINPPEM
LSPDESSHELLKQPFLLDSSISVAHWLNYHQLNVNDFIRFQVGEKTKSAEK
Nucleotide sequence
Length: 1,448
>KH2012:KH.C9.13.v2.A.nonSL7-1
AAGGTAAACGTATTAGGTTAACTTATTTATTGGCGTTCTGTAATCGAATTAATCGTTGTT
TGGAATAAAACAAGAAACATGCTTCGATTTTCTGTTCTACTGCGGAGGTCAAATTTATCT
GGCTGTCGTTTATGGTTCAGTACCGGAGAACCAAACAAAGAAGTGAATACAAAACAAGTT
TTAATGGAGTTACGGCGTAAAACAGGCTATCCGTTAATAACTTGTCGCCAAGCTCTGCAG
GCGTCAGGTTATAACGTGGAAAAGGCAAAAGAACATTTGTTACAACTCGCAAAAGAGAAA
GGTTGGAACACGATGCAGATGGACGGGGGGGTGCTGAAAGAAGGATTAATATCAGTTGTA
ACGAATAAAAATAATGGATTAATTGTTGAGGTGAACTGCCAAACAGATTTTGTTGCAAAA
ACCAAAGAATTTCAAAGTTTAGTAAAAGATGCAGCTCAAACATTACTTGATGTTTATTCA
ACCCAACAACCTTCCAAGATTGATTTGAATCCACCTGAACTTCTGAAGTTGGTGGTTTCT
GGAAAGAAACAAACTATTGAAGATACTGTGGCTATTACTATTGGCAAACTAAAGGAGAAA
ATTGAAATTCGCCGAGCTTCGTTGCTATCCGTCCCAACCAATTCCATTCTCGCTGTTTAC
ATTCATCCGAGCGTCCTCATCTCAAAAACTCGGCCAGGATCTACTTTAGGAAGTTATGGG
GCCATGGTGTCACTTTCACCAACTGATGAGTCAATTTTTTTGAATACTGGAAAGTCCTCC
ATCAAAATGGCTGGCAGAGATATTGCGCAACATATAGTTGGAATGAACCCATCATGTATT
GGAACATGCTTAAAACCAACCCCAAATAAAAGCGTGACGGACTCCACACCAGATGATGAC
GTTATTAACCCTCCAGAAATGCTTAGTCCAGATGAATCAAGTCATGAACTACTTAAACAA
CCATTTCTTTTAGACAGTTCTATCTCAGTGGCTCATTGGTTGAATTATCACCAACTAAAC
GTGAACGATTTTATTCGTTTTCAAGTCGGAGAGAAAACGAAATCTGCCGAGAAATAATTT
AAAGTTAAAAATCATGAAGATAGGGCTGGATACAGTTAAGTGTATGATGGAAAAATGATG
TTGCTAATTTCAGCTCATTACAGATTGGTTTCATCATTGTGTTTTTTCAACTTGATGCTT
ATGCTGTTAATACAAGTTTTTTAAACATAGGCAAGCAAGTAGAAAAGTATAATTAAATTA
TATAACTGTAAAAGGGCATGTATTTTAAAATATCATCATCATATAGTAGGGTGGAAAAAG
ATGGGACACTTTTTCTTGTCCCATTTGGTAGTAAACAAAGTACATTCGTTATAAAACCAT
GTTTTTACGACTCTAATAGACTGTTGTTAACCGTTTGCAAGAATTACAACACGATTAGGA
TATTTAAA
| PANTHER |
Transl_elong_EFTs/EF1B (IPR001816) - T[26-349] 3.5E-72 |
| SUPERFAMILY |
UBA-like_sf (IPR009060) - T[50-95] 3.83E-7 |
| Hamap |
Transl_elong_EFTs/EF1B (IPR001816) - T[50-351] 19.743 |
| Gene3D |
EF-Ts_dimer_sf (IPR036402) - T[106-220] 3.4E-28 - T[226-351] 1.9E-24 |
| SUPERFAMILY |
EF-Ts_dimer_sf (IPR036402) - T[106-140] 5.16E-21 - T[258-344] 5.16E-21 |
| Pfam |
Transl_elong_EFTs/EF1B_dimer (IPR014039) - T[119-273] 1.7E-23 |
| ProSitePatterns |
Transl_elong_Ts_CS (IPR018101) - T[123-133] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| EFTS_HUMAN | 31.722 % | 155 | 1.11E-44 |