- EST 'BW301973' >
- Transcript 'KH2012:KH.C9.13.v2.A...'
Transcript Model
Transcript Id
KH2012:KH.C9.13.v2.A.nonSL5-1
Possible name(s)
TSFM
Gene model
Location
KhC9 [3,515,505 / 3,520,894]
Amino acid sequence
Length: 350
>KH.C9.13.v2.A.nonSL5-1
IYWRSVIELIVVWNKTRNMLRFSVLLRRSNLSGCRLWFSTGEPNKEVNTKQVLMELRRKT
GYPLITCRQALQASGYNVEKAKEHLLQLAKEKGWNTMQMDGGVLKEGLISVVTNKNNGLI
VEVNCQTDFVAKTKEFQSLVKDAAQTLLDVYSTQQPSKIDLNPPELLKLVVSGKKQTIED
TVAITIGKLKEKIEIRRASLLSVPTNSILAVYIHPSVLISKTRPGSTLGSYGAMVSLSPT
DESIFLNTGKSSIKMAGRDIAQHIVGMNPSCIGTCLKPTPNKSVTDSTPDDDVINPPEML
SPDESSHELLKQPFLLDSSISVAHWLNYHQLNVNDFIRFQVGEKTKSAEK
Nucleotide sequence
Length: 1,424
>KH2012:KH.C9.13.v2.A.nonSL5-1
ATTTATTGGCGTTCTGTAATCGAATTAATCGTTGTTTGGAATAAAACAAGAAACATGCTT
CGATTTTCTGTTCTACTGCGGAGGTCAAATTTATCTGGCTGTCGTTTATGGTTCAGTACC
GGAGAACCAAACAAAGAAGTGAATACAAAACAAGTTTTAATGGAGTTACGGCGTAAAACA
GGCTATCCGTTAATAACTTGTCGCCAAGCTCTGCAGGCGTCAGGTTATAACGTGGAAAAG
GCAAAAGAACATTTGTTACAACTCGCAAAAGAGAAAGGTTGGAACACGATGCAGATGGAC
GGGGGGGTGCTGAAAGAAGGATTAATATCAGTTGTAACGAATAAAAATAATGGATTAATT
GTTGAGGTGAACTGCCAAACAGATTTTGTTGCAAAAACCAAAGAATTTCAAAGTTTAGTA
AAAGATGCAGCTCAAACATTACTTGATGTTTATTCAACCCAACAACCTTCCAAGATTGAT
TTGAATCCACCTGAACTTCTGAAGTTGGTGGTTTCTGGAAAGAAACAAACTATTGAAGAT
ACTGTGGCTATTACTATTGGCAAACTAAAGGAGAAAATTGAAATTCGCCGAGCTTCGTTG
CTATCCGTCCCAACCAATTCCATTCTCGCTGTTTACATTCATCCGAGCGTCCTCATCTCA
AAAACTCGGCCAGGATCTACTTTAGGAAGTTATGGGGCCATGGTGTCACTTTCACCAACT
GATGAGTCAATTTTTTTGAATACTGGAAAGTCCTCCATCAAAATGGCTGGCAGAGATATT
GCGCAACATATAGTTGGAATGAACCCATCATGTATTGGAACATGCTTAAAACCAACCCCA
AATAAAAGCGTGACGGACTCCACACCAGATGATGACGTTATTAACCCTCCAGAAATGCTT
AGTCCAGATGAATCAAGTCATGAACTACTTAAACAACCATTTCTTTTAGACAGTTCTATC
TCAGTGGCTCATTGGTTGAATTATCACCAACTAAACGTGAACGATTTTATTCGTTTTCAA
GTCGGAGAGAAAACGAAATCTGCCGAGAAATAATTTAAAGTTAAAAATCATGAAGATAGG
GCTGGATACAGTTAAGTGTATGATGGAAAAATGATGTTGCTAATTTCAGCTCATTACAGA
TTGGTTTCATCATTGTGTTTTTTCAACTTGATGCTTATGCTGTTAATACAAGTTTTTTAA
ACATAGGCAAGCAAGTAGAAAAGTATAATTAAATTATATAACTGTAAAAGGGCATGTATT
TTAAAATATCATCATCATATAGTAGGGTGGAAAAAGATGGGACACTTTTTCTTGTCCCAT
TTGGTAGTAAACAAAGTACATTCGTTATAAAACCATGTTTTTACGACTCTAATAGACTGT
TGTTAACCGTTTGCAAGAATTACAACACGATTAGGATATTTAAA
| PANTHER |
Transl_elong_EFTs/EF1B (IPR001816) - T[25-348] 3.4E-72 |
| Hamap |
Transl_elong_EFTs/EF1B (IPR001816) - T[49-350] 19.743 |
| SUPERFAMILY |
UBA-like_sf (IPR009060) - T[49-94] 3.83E-7 |
| Gene3D |
EF-Ts_dimer_sf (IPR036402) - T[105-219] 3.4E-28 - T[225-350] 1.9E-24 |
| SUPERFAMILY |
EF-Ts_dimer_sf (IPR036402) - T[105-139] 5.09E-21 - T[257-343] 5.09E-21 |
| Pfam |
Transl_elong_EFTs/EF1B_dimer (IPR014039) - T[118-272] 1.7E-23 |
| ProSitePatterns |
Transl_elong_Ts_CS (IPR018101) - T[122-132] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| EFTS_HUMAN | 31.722 % | 155 | 1.28E-44 |